RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SLAIN2Q9P270 581 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CDH9Q9ULB4 789 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 MKL2Q9ULH7 1088 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 RUVBL2Q9Y230 463 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 AFF2P51816 1311 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SEC24AO95486 1093 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 PROCP04070 461 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 PNPLA4P41247 253 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SYTL3Q4VX76 610 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NOP9Q86U38 636 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 AFG1LQ8WV93 481 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 PYDC1Q8WXC3 89 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NYAP2Q9P242 653 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 PCDHA3Q9Y5H8 950 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 KDM6AO15550 1401 aaPredicted RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 ZFYVE16Q7Z3T8 1539 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 MMP13P45452 471 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 GLRA4Q5JXX5 417 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 KIAA0408Q6ZU52 694 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ACTRT2Q8TDY3 377 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 C17orf50Q8WW18 174 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ING4Q9UNL4 249 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 F9P00740 461 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 RPL10AP62906 217 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 TRAP1Q12931 704 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 C11orf88Q6PI97 169 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ACTL9Q8TC94 416 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 TMEM114B3SHH9 223 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.065e-8■■□□□ 11.4
APOB-201ENST00000233242 CYP2C9P11712 490 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 UQCRBP14927 111 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CYP11B2P19099 503 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 GARTP22102 1010 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NCALDP61601 193 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NT5DC3Q86UY8 548 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SERPINA6P08185 405 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SPIRE1Q08AE8 756 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 AKAP14Q86UN6 197 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 LPAR1Q92633 364 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 FAM120BQ96EK7 910 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ADAM28Q9UKQ2 775 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 EFCAB10A6NFE3 127 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CCDC166P0CW27 439 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 RPL14P50914 215 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 SMAD1Q15797 465 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 RIPOR1Q6ZS17 1223 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ZSCAN32Q9NX65 697 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CCDC182A6NF36 153 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 FAM196BA6NMK8 535 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 FESP07332 822 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ARPP19P56211 112 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 BNIP2Q12982 314 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SLC5A9Q2M3M2 681 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 TKFCQ3LXA3 575 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 LMBRD2Q68DH5 695 aaPredicted RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 TBX20Q9UMR3 447 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ZNF682O95780 498 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 AUHQ13825 339 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 SNX32Q86XE0 403 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ACMSDQ8TDX5 336 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 HDAC7Q8WUI4 952 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 WDR41Q9HAD4 459 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 MOV10Q9HCE1 1003 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 CLIC5Q9NZA1 410 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 CRB1P82279 1406 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 SLC15A2Q16348 729 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 OTOAQ7RTW8 1153 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 KRT78Q8N1N4 520 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 UBASH3BQ8TF42 649 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 FAM237AA0A1B0GTK4 181 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.061e-323■■■■■ 30.2
APOB-201ENST00000233242 HIST2H2ACQ16777 129 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 HIST2H2AA3Q6FI13 130 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 PTCD3Q96EY7 689 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.43□□□□□ -1.061e-53■■□□□ 11.9
APOB-201ENST00000233242 VANGL2Q9ULK5 521 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ZNF335Q9H4Z2 1342 aaPredicted RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 DENND5BQ6ZUT9 1274 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 PIWIL2Q8TC59 973 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ANAPC2Q9UJX6 822 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 UMODL1Q5DID0 1318 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 TGFBR2P37173 567 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 BTN2A2Q8WVV5 523 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 NSUN4Q96CB9 384 aaKnown RBP8.43□□□□□ -1.06
APOB-201ENST00000233242 SPATA33Q96N06 139 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 AGAP1Q9UPQ3 857 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ABCC3O15438 1527 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 CLRN2A0PK11 232 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 ARPC4P59998 168 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 VPS72Q15906 364 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 RASSF5Q8WWW0 418 aa8.43□□□□□ -1.06
APOB-201ENST00000233242 INTS13Q9NVM9 706 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms