RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 DcakdQ8BHC4 231 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 RorbQ8R1B8 470 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Aldh1a3Q9JHW9 512 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Psd3Q2PFD7 1037 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pyroxd1Q3TMV7 498 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Dpysl3Q62188 570 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Celf6Q7TN33 460 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tex13c3Q810P0 219 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 GmppbQ8BTZ7 360 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Uxs1Q91XL3 420 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mrps15Q9DC71 258 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Net1Q9Z206 595 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Bscl2Q9Z2E9 383 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 FanceB8JJD6 213 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Epb41l4aP52963 686 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Usp39Q3TIX9 564 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Glis3Q6XP49 780 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tubgcp5Q8BKN5 1024 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Sugp1Q8CH02 643 aaKnown RBP14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pitpnm2Q6ZPQ6 1335 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pou2f3P31362 431 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cd86P42082 309 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 4933427I04RikQ3V053 235 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Coq8aQ60936 645 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Olfr212Q7TS33 327 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ubash3bQ8BGG7 638 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ankef1Q9D2J7 775 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cyp3a44Q9EQW4 504 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Wdr72D3YYM4 1114 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Foxn2E9Q7L6 429 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pdk4O70571 412 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Sstr1P30873 391 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Smyd1P97443 490 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 TufmQ8BFR5 452 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 TbccQ8VCN9 341 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Vangl2Q91ZD4 521 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Actrt1Q9D9J3 376 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Hey2Q9QUS4 339 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Abca6Q8K441 1624 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tsc22d2E9Q7M2 769 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 FynP39688 537 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 CartptP56388 129 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 YdjcQ14BV6 310 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Raver2Q7TPD6 673 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Nim1kQ8BHI9 436 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Lsm14aQ8K2F8 462 aaKnown RBP14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tmed5Q9CXE7 229 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Nudt5Q9JKX6 218 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Trim10Q9WUH5 489 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Knl1Q66JQ7 1612 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 XdhQ00519 1335 aa14.34□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cyp4a12bA2A974 508 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Fkbp1aP26883 108 aaKnown RBP14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 DselQ0VBN2 1207 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rpusd2Q149F1 553 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tbx2Q60707 711 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Vsx2Q61412 361 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ube3cQ80U95 1083 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Chtf18Q8BIW9 969 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rprd1aQ8VDS4 312 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cyp4a12aQ91WL5 508 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Dctn2Q99KJ8 402 aa14.33□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm21497A0A087WRK3 222 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 MrasO08989 208 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rnf145Q5SWK7 663 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Traf3Q60803 567 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kcna4Q61423 654 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 ZfatQ7TS63 1237 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prdm4Q80V63 803 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 SntnQ8C9X1 147 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kct2Q8K201 259 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Fam227bQ9D518 532 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Smad9Q9JIW5 430 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Aox3G3X982 1335 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21149A0A0G2JFY7 255 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vmn2r38G3UYA8 861 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vmn2r33K7N705 861 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vmn2r44L7N2E1 861 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rpl36P47964 105 aaKnown RBP14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nr6a1Q64249 495 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Q80WR5 230 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm9758Q80ZT2 255 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Atg4cQ811C2 458 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pex5lQ8C437 567 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nlrp4bQ8C6J9 863 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 OgtQ8CGY8 1046 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kiaa0319lQ8K135 1048 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Actr8Q8R2S9 624 aaKnown RBP14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 D830030K20RikE9PYQ5 218 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm3043K7N693 218 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Cyp2c68K7N6C2 491 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Folh1O35409 752 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Hmox2O70252 315 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rtn2O70622 471 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 AfpP02772 605 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 PrkcdP28867 674 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pold1P52431 1105 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Klrb1Q0ZUP1 214 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tespa1Q3U132 458 aa14.33□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pdap1Q3UHX2 181 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms