Protein–RNA interactions for Protein: Q9JHW9

Aldh1a3, Aldehyde dehydrogenase family 1 member A3, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a3Q9JHW9 Gm25239-201ENSMUST00000174915 86 ntBASIC39.04■■■■□ 3.84
Aldh1a3Q9JHW9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Aldh1a3Q9JHW9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Aldh1a3Q9JHW9 Gm15042-201ENSMUST00000120212 883 ntBASIC34.24■■■■□ 3.07
Aldh1a3Q9JHW9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Aldh1a3Q9JHW9 Gm24109-201ENSMUST00000175489 103 ntBASIC33.72■■■□□ 2.99
Aldh1a3Q9JHW9 Gm15045-201ENSMUST00000117359 883 ntBASIC33.44■■■□□ 2.94
Aldh1a3Q9JHW9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Aldh1a3Q9JHW9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Aldh1a3Q9JHW9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Aldh1a3Q9JHW9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
Aldh1a3Q9JHW9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Aldh1a3Q9JHW9 Gm23366-201ENSMUST00000175022 89 ntBASIC32.67■■■□□ 2.82
Aldh1a3Q9JHW9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Aldh1a3Q9JHW9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Aldh1a3Q9JHW9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Aldh1a3Q9JHW9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.85■■■□□ 2.69
Aldh1a3Q9JHW9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Aldh1a3Q9JHW9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Aldh1a3Q9JHW9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Aldh1a3Q9JHW9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.45■■■□□ 2.63
Aldh1a3Q9JHW9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Aldh1a3Q9JHW9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Aldh1a3Q9JHW9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Aldh1a3Q9JHW9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Aldh1a3Q9JHW9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Aldh1a3Q9JHW9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.25■■■□□ 2.59
Aldh1a3Q9JHW9 Psd-208ENSMUST00000224556 2034 ntBASIC31.24■■■□□ 2.59
Aldh1a3Q9JHW9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.15■■■□□ 2.58
Aldh1a3Q9JHW9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
Aldh1a3Q9JHW9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Aldh1a3Q9JHW9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Aldh1a3Q9JHW9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Aldh1a3Q9JHW9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Aldh1a3Q9JHW9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.82■■■□□ 2.52
Aldh1a3Q9JHW9 Gm25238-201ENSMUST00000174914 89 ntBASIC30.76■■■□□ 2.51
Aldh1a3Q9JHW9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.65■■■□□ 2.5
Aldh1a3Q9JHW9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Aldh1a3Q9JHW9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Aldh1a3Q9JHW9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Aldh1a3Q9JHW9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Aldh1a3Q9JHW9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Aldh1a3Q9JHW9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Aldh1a3Q9JHW9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
Aldh1a3Q9JHW9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.14■■■□□ 2.42
Aldh1a3Q9JHW9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.11■■■□□ 2.41
Aldh1a3Q9JHW9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Aldh1a3Q9JHW9 Gm27325-201ENSMUST00000175467 74 ntBASIC30.02■■■□□ 2.4
Aldh1a3Q9JHW9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Aldh1a3Q9JHW9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Aldh1a3Q9JHW9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Aldh1a3Q9JHW9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.9■■■□□ 2.38
Aldh1a3Q9JHW9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Aldh1a3Q9JHW9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Aldh1a3Q9JHW9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.79■■■□□ 2.36
Aldh1a3Q9JHW9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.79■■■□□ 2.36
Aldh1a3Q9JHW9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Aldh1a3Q9JHW9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.68■■■□□ 2.34
Aldh1a3Q9JHW9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Aldh1a3Q9JHW9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Aldh1a3Q9JHW9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Aldh1a3Q9JHW9 Gm25262-201ENSMUST00000174934 133 ntBASIC29.5■■■□□ 2.31
Aldh1a3Q9JHW9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Aldh1a3Q9JHW9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
Aldh1a3Q9JHW9 Rab21-202ENSMUST00000218831 843 ntBASIC29.43■■■□□ 2.3
Aldh1a3Q9JHW9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Aldh1a3Q9JHW9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Aldh1a3Q9JHW9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Aldh1a3Q9JHW9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.33■■■□□ 2.29
Aldh1a3Q9JHW9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.33■■■□□ 2.29
Aldh1a3Q9JHW9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Aldh1a3Q9JHW9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Aldh1a3Q9JHW9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Aldh1a3Q9JHW9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Aldh1a3Q9JHW9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Aldh1a3Q9JHW9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.19■■■□□ 2.26
Aldh1a3Q9JHW9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Aldh1a3Q9JHW9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Aldh1a3Q9JHW9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Aldh1a3Q9JHW9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Aldh1a3Q9JHW9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Aldh1a3Q9JHW9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.01■■■□□ 2.23
Aldh1a3Q9JHW9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Aldh1a3Q9JHW9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.99■■■□□ 2.23
Aldh1a3Q9JHW9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Aldh1a3Q9JHW9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.92■■■□□ 2.22
Aldh1a3Q9JHW9 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.89■■■□□ 2.22
Aldh1a3Q9JHW9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Aldh1a3Q9JHW9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.88■■■□□ 2.21
Aldh1a3Q9JHW9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Aldh1a3Q9JHW9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.8■■■□□ 2.2
Aldh1a3Q9JHW9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Aldh1a3Q9JHW9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Aldh1a3Q9JHW9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Aldh1a3Q9JHW9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Aldh1a3Q9JHW9 Gm26115-201ENSMUST00000175605 87 ntBASIC28.71■■■□□ 2.19
Aldh1a3Q9JHW9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Aldh1a3Q9JHW9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.69■■■□□ 2.18
Aldh1a3Q9JHW9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Aldh1a3Q9JHW9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.62■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 144.3 ms