RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 GOLGA7BQ2TAP0 167 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 CCDC153Q494R4 210 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 RINLQ6ZS11 566 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 C10orf82Q8WW14 230 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 DCUN1D5Q9BTE7 237 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 TAS2R1Q9NYW7 299 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 PCDHA2Q9Y5H9 948 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 CHADO15335 359 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 ALBP02768 609 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 VDRP11473 427 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 PSMA4P25789 261 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 PSEN1P49768 467 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 NR1H2P55055 460 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 SPRED3Q2MJR0 410 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 LLGL2Q6P1M3 1020 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 PATL1Q86TB9 770 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 CLVS1Q8IUQ0 354 aaPredicted RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 CCDC117Q8IWD4 279 aaPredicted RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 SEC14L1Q92503 715 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 SEMA4DQ92854 862 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 HPDLQ96IR7 371 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 UBR1Q8IWV7 1749 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 HNRNPRO43390 633 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 FOLH1Q04609 750 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 SSU72Q9NP77 194 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 ARHGEF38Q9NXL2 777 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 FNDC3AQ9Y2H6 1198 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 LRRC37A3O60309 1634 aa15.08■□□□□ 0.01
VPS36-207ENST00000611132 EEF2KO00418 725 aaKnown RBP15.08■□□□□ 0
VPS36-207ENST00000611132 ITGB3P05106 788 aa15.08■□□□□ 0
VPS36-207ENST00000611132 PTPN11Q06124 597 aaPredicted RBP15.08■□□□□ 0
VPS36-207ENST00000611132 MTMR2Q13614 643 aa15.08■□□□□ 0
VPS36-207ENST00000611132 IER5Q5VY09 327 aa15.08■□□□□ 0
VPS36-207ENST00000611132 KIAA2013Q8IYS2 634 aa15.08■□□□□ 0
VPS36-207ENST00000611132 ZNF384Q8TF68 577 aa15.08■□□□□ 0
VPS36-207ENST00000611132 SEPT1Q8WYJ6 367 aa15.08■□□□□ 0
VPS36-207ENST00000611132 EPAS1Q99814 870 aa15.08■□□□□ 0
VPS36-207ENST00000611132 MECRQ9BV79 373 aa15.08■□□□□ 0
VPS36-207ENST00000611132 GALNT8Q9NY28 637 aa15.08■□□□□ 0
VPS36-207ENST00000611132 C2orf71A6NGG8 1288 aa15.08■□□□□ 0
VPS36-207ENST00000611132 H0Y626 953 aa15.08■□□□□ 0
VPS36-207ENST00000611132 PSMD3O43242 534 aa15.08■□□□□ 0
VPS36-207ENST00000611132 TRIM16O95361 564 aa15.08■□□□□ 0
VPS36-207ENST00000611132 GLRBP48167 497 aa15.08■□□□□ 0
VPS36-207ENST00000611132 ZNF555Q8NEP9 628 aa15.08■□□□□ 0
VPS36-207ENST00000611132 DLG3Q92796 817 aa15.08■□□□□ 0
VPS36-207ENST00000611132 WNK4Q96J92 1243 aa15.08■□□□□ 0
VPS36-207ENST00000611132 CLPTM1LQ96KA5 538 aa15.08■□□□□ 0
VPS36-207ENST00000611132 TEX13BQ9BXU2 312 aa15.08■□□□□ 0
VPS36-207ENST00000611132 C12orf65Q9H3J6 166 aaKnown RBP15.08■□□□□ 0
VPS36-207ENST00000611132 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.08■□□□□ 0
VPS36-207ENST00000611132 M0R3G1 203 aa15.08■□□□□ 0
VPS36-207ENST00000611132 PRKAA1Q13131 559 aa15.08■□□□□ 0
VPS36-207ENST00000611132 AASDHQ4L235 1098 aaPredicted RBP15.08■□□□□ 0
VPS36-207ENST00000611132 PLEKHA7Q6IQ23 1121 aa15.08■□□□□ 0
VPS36-207ENST00000611132 NIPA1Q7RTP0 329 aa15.08■□□□□ 0
VPS36-207ENST00000611132 ADCK1Q86TW2 530 aa15.08■□□□□ 0
VPS36-207ENST00000611132 CROCCP3Q8IVE0 287 aa15.08■□□□□ 0
VPS36-207ENST00000611132 TERB1Q8NA31 727 aa15.08■□□□□ 0
VPS36-207ENST00000611132 RIN3Q8TB24 985 aa15.08■□□□□ 0
VPS36-207ENST00000611132 TSPAN17Q96FV3 270 aa15.08■□□□□ 0
VPS36-207ENST00000611132 S100A14Q9HCY8 104 aa15.08■□□□□ 0
VPS36-207ENST00000611132 LNPEPQ9UIQ6 1025 aa15.08■□□□□ 0
VPS36-207ENST00000611132 GFAPP14136 432 aa15.07■□□□□ 0
VPS36-207ENST00000611132 TRPC1P48995 793 aa15.07■□□□□ 0
VPS36-207ENST00000611132 NEK2P51955 445 aa15.07■□□□□ 0
VPS36-207ENST00000611132 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
VPS36-207ENST00000611132 SYTL5Q8TDW5 730 aaPredicted RBP15.07■□□□□ 0
VPS36-207ENST00000611132 SLCO2A1Q92959 643 aa15.07■□□□□ 0
VPS36-207ENST00000611132 FAR2Q96K12 515 aa15.07■□□□□ 0
VPS36-207ENST00000611132 FAM49AQ9H0Q0 323 aaPredicted RBP15.07■□□□□ 0
VPS36-207ENST00000611132 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
VPS36-207ENST00000611132 WASF2Q9Y6W5 498 aa15.07■□□□□ 0
VPS36-207ENST00000611132 RBL1P28749 1068 aa15.07■□□□□ 0
VPS36-207ENST00000611132 PTP4A2Q12974 167 aa15.07■□□□□ 0
VPS36-207ENST00000611132 LPCAT4Q643R3 524 aa15.07■□□□□ 0
VPS36-207ENST00000611132 ADGRD1Q6QNK2 874 aa15.07■□□□□ 0
VPS36-207ENST00000611132 TMEM161BQ8NDZ6 487 aa15.07■□□□□ 0
VPS36-207ENST00000611132 TNIP2Q8NFZ5 429 aa15.07■□□□□ 0
VPS36-207ENST00000611132 RNF139Q8WU17 664 aa15.07■□□□□ 0
VPS36-207ENST00000611132 MRPS26Q9BYN8 205 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 MAP3K20Q9NYL2 800 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 HEATR9A2RTY3 570 aa15.07■□□□□ 0
VPS36-207ENST00000611132 RGL2O15211 777 aa15.07■□□□□ 0
VPS36-207ENST00000611132 SNX2O60749 519 aa15.07■□□□□ 0
VPS36-207ENST00000611132 TBX10O75333 385 aa15.07■□□□□ 0
VPS36-207ENST00000611132 LGR5O75473 907 aa15.07■□□□□ 0
VPS36-207ENST00000611132 SOX11P35716 441 aa15.07■□□□□ 0
VPS36-207ENST00000611132 PKNOX1P55347 436 aa15.07■□□□□ 0
VPS36-207ENST00000611132 MPP3Q13368 585 aa15.07■□□□□ 0
VPS36-207ENST00000611132 POLNQ7Z5Q5 900 aa15.07■□□□□ 0
VPS36-207ENST00000611132 TNIP3Q96KP6 325 aa15.07■□□□□ 0
VPS36-207ENST00000611132 PDCD2LQ9BRP1 358 aa15.07■□□□□ 0
VPS36-207ENST00000611132 STN1Q9H668 368 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 C6orf203Q9P0P8 240 aaPredicted RBP15.07■□□□□ 0
VPS36-207ENST00000611132 RUVBL2Q9Y230 463 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 C15orf38-AP3S2A0A0A6YYH1 394 aa15.07■□□□□ 0
VPS36-207ENST00000611132 BIRC5O15392 142 aa15.07■□□□□ 0
VPS36-207ENST00000611132 MTSS1O43312 755 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms