RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TADA2BQ86TJ2 420 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 TMC2Q8TDI7 906 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CYFIP2Q96F07 1278 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ACOX2Q99424 681 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 KCTD10Q9H3F6 313 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CYLDQ9NQC7 956 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 OSER1Q9NX31 292 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 CACNA2D2Q9NY47 1150 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 NAGPAQ9UK23 515 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 NUDT5Q9UKK9 219 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
SF3B3-202ENST00000562722 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 PCDHA5Q9Y5H7 936 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 RAD54BQ9Y620 910 aa13.69□□□□□ -0.22
SF3B3-202ENST00000562722 MYOFQ9NZM1 2061 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 SPAARA0A1B0GVQ0 90 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 IKBKBO14920 756 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 OPHN1O60890 802 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 SERPINF2P08697 491 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 TRIM49P0CI25 452 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 TRIM49CP0CI26 452 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 KRT13P13646 458 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 PLA2G4AP47712 749 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 GCLMP48507 274 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 VAMP7P51809 220 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 SIM1P81133 766 aaPredicted RBP13.68□□□□□ -0.22
SF3B3-202ENST00000562722 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
SF3B3-202ENST00000562722 TOGARAM2Q6ZUX3 1019 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 RGL4Q8IZJ4 473 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 SPRYD3Q8NCJ5 442 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
SF3B3-202ENST00000562722 HSPA12BQ96MM6 686 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 HNRNPABQ99729 332 aaKnown RBP13.68□□□□□ -0.22
SF3B3-202ENST00000562722 NMUR1Q9HB89 426 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 PLK2Q9NYY3 685 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 MARK1Q9P0L2 795 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 HCN2Q9UL51 889 aa13.68□□□□□ -0.22
SF3B3-202ENST00000562722 IGHV1OR15-9A0A0B4J2B8 117 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 PRRT4C9JH25 899 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 HYAL3O43820 417 aaPredicted RBP13.67□□□□□ -0.22
SF3B3-202ENST00000562722 GREM1O60565 184 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 RALAP11233 206 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 PFKFB1P16118 471 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 NR2F2P24468 414 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 INCA1Q0VD86 236 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 PEAR1Q5VY43 1037 aaPredicted RBP13.67□□□□□ -0.22
SF3B3-202ENST00000562722 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 SNX21Q969T3 373 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 NIF3L1Q9GZT8 377 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 SLC6A17Q9H1V8 727 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 CYP3A43Q9HB55 503 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
SF3B3-202ENST00000562722 RASAL2Q9UJF2 1139 aa13.67□□□□□ -0.22
SF3B3-202ENST00000562722 TMEM8BA6NDV4 472 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 HHLA1C9JL84 531 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 SYPP08247 313 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 HMBSP08397 361 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
SF3B3-202ENST00000562722 SEMA3BQ13214 749 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 PKP1Q13835 747 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 STARD3Q14849 445 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 PLEKHG6Q3KR16 790 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 SYCP2LQ5T4T6 812 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 KLHDC10Q6PID8 442 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
SF3B3-202ENST00000562722 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 OR2I1PQ8NGU4 316 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 TMEM174Q8WUU8 243 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 HEXIM2Q96MH2 286 aaKnown RBP13.66□□□□□ -0.22
SF3B3-202ENST00000562722 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
SF3B3-202ENST00000562722 GABRG3Q99928 467 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 PNPLA8Q9NP80 782 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 WASF3Q9UPY6 502 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 MAPK8IP1Q9UQF2 711 aa13.66□□□□□ -0.22
SF3B3-202ENST00000562722 MEI4A8MW99 385 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 WASH3PC4AMC7 463 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 CILPO75339 1184 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 STC2O76061 302 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 MYL1P05976 194 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 GNSP15586 552 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 PSEN1P49768 467 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 KIF11P52732 1056 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 EFEMP1Q12805 493 aa13.65□□□□□ -0.22
SF3B3-202ENST00000562722 WDR45BQ5MNZ6 344 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms