RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KDM1AO60341 852 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 PABPC1LQ4VXU2 614 aaKnown RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 MARC1Q5VT66 337 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 CARNS1A5YM72 827 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 ALDH18A1P54886 795 aaKnown RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 DDR2Q16832 855 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 PREPLQ4J6C6 727 aaPredicted RBP17.9■□□□□ 0.46
PTPN21-208ENST00000556564 MRNIPQ6NTE8 343 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 CARD9Q9H257 536 aa17.9■□□□□ 0.46
PTPN21-208ENST00000556564 GYG2O15488 501 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 YBX3P16989 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 GRM5P41594 1212 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 RBM43Q6ZSC3 357 aaKnown RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 MSL3Q8N5Y2 521 aaKnown RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 C18orf25Q96B23 403 aaPredicted RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 GOLGA2P5Q9HBQ8 144 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 XAB2Q9HCS7 855 aaKnown RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 WWOXQ9NZC7 414 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 TBC1D3BA6NDS4 549 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 SGCGQ13326 291 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 ERAP2Q6P179 960 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 SGF29Q96ES7 293 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 SLC28A3Q9HAS3 691 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 TUBGCP4Q9UGJ1 667 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 PADI3Q9ULW8 664 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 CRTAMO95727 393 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 NPR3P17342 541 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 VCLP18206 1134 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 SNCBQ16143 134 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 MFSD4BQ5TF39 518 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 ZNF513Q8N8E2 541 aaPredicted RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 EXD1Q8NHP7 514 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 TOPAZ1Q8N9V7 1692 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 TRIM16O95361 564 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 RPL9P32969 192 aaKnown RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 DENND1CQ8IV53 801 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 OR5B17Q8NGF7 314 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 LZICQ8WZA0 190 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 MARCOQ9UEW3 520 aaPredicted RBP17.89■□□□□ 0.45
PTPN21-208ENST00000556564 E2F6O75461 281 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 HAUS5O94927 633 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 RARGP13631 454 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 RETSATQ6NUM9 610 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.45
PTPN21-208ENST00000556564 ACOX1Q15067 660 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 E2F5Q15329 346 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 PHACTR4Q8IZ21 702 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 RUBCNQ92622 972 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 SNRPAP09012 282 aaKnown RBP17.88■□□□□ 0.45
PTPN21-208ENST00000556564 HDCP19113 662 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 FNTAP49354 379 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 PLCL1Q15111 1095 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 HECTD3Q5T447 861 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 RAP1GAP2Q684P5 730 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 FAM183BPQ6ZVS7 135 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 ACP6Q9NPH0 428 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 SPAG6O75602 509 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 GEMIN4P57678 1058 aaKnown RBP17.88■□□□□ 0.45
PTPN21-208ENST00000556564 GAS2L1Q99501 681 aaPredicted RBP17.88■□□□□ 0.45
PTPN21-208ENST00000556564 SMAPO00193 183 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 TADA3O75528 432 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 RENBPP51606 427 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 ARHGDIAP52565 204 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 TTLL9Q3SXZ7 439 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 FBXO36Q8NEA4 188 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 ZDHHC6Q9H6R6 413 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
PTPN21-208ENST00000556564 ACRP10323 421 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 ITGALP20701 1170 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 PPM1AP35813 382 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 MRPL45Q9BRJ2 306 aaKnown RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 RNF112Q9ULX5 631 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 ZMYM2Q9UBW7 1377 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 DARSP14868 501 aaKnown RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 AARS2Q5JTZ9 985 aaKnown RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 PTAR1Q7Z6K3 402 aaPredicted RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 PIH1D1Q9NWS0 290 aaKnown RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 VPS9D1Q9Y2B5 631 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 FUT2Q10981 343 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 NCKAP1Q9Y2A7 1128 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 SDR42E2A6NKP2 422 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 MAPK9P45984 424 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 APBB2Q92870 758 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 FAM84AQ96KN4 292 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 A0A0A6YYK5 440 aaPredicted RBP17.87■□□□□ 0.45
PTPN21-208ENST00000556564 TPH1P17752 444 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 STX3Q13277 289 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 TBC1D13Q9NVG8 400 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 CNTNAP1P78357 1384 aa17.87■□□□□ 0.45
PTPN21-208ENST00000556564 TCP11X1B4DZS4 312 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 DDX5P17844 614 aaKnown RBP17.86■□□□□ 0.45
PTPN21-208ENST00000556564 ITGB6P18564 788 aa17.86■□□□□ 0.45
PTPN21-208ENST00000556564 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.45
PTPN21-208ENST00000556564 ZC3H12AQ5D1E8 599 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms