RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MAGEA13PA6NCF6 341 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 CCDC130P13994 396 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 ZNF143P52747 638 aaPredicted RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 SNX17Q15036 470 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 MTFR1Q15390 333 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 SPDYAQ5MJ70 313 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 ANKMY2Q8IV38 441 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 SLC35B2Q8TB61 432 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 NCSTNQ92542 709 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 NKD2Q969F2 451 aaPredicted RBP12.02□□□□□ -0.49
USP35-207ENST00000530546 AZIN2Q96A70 460 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 CNPY3Q9BT09 278 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.49
USP35-207ENST00000530546 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 PTPN7P35236 360 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 EIF3EP60228 445 aaKnown RBP12.01□□□□□ -0.49
USP35-207ENST00000530546 SOWAHAQ2M3V2 549 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 FOXB2Q5VYV0 432 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 BBS12Q6ZW61 710 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 ECHDC2Q86YB7 292 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 UNC45BQ8IWX7 931 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 FAM71DQ8N9W8 422 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 NDNQ99608 321 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 VPS37BQ9H9H4 285 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 SCN1AP35498 2009 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 C2CD4BA6NLJ0 364 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 SPTLC1O15269 473 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 ITGAVP06756 1048 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 GM2AP17900 193 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 LMO2P25791 158 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 MGAT5Q09328 741 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 SFSWAPQ12872 951 aaKnown RBP12.01□□□□□ -0.49
USP35-207ENST00000530546 KRT81Q14533 505 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 ZBED8Q8IZ13 594 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 ANKLE1Q8NAG6 615 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 MAGEB18Q96M61 343 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 SERPINB12Q96P63 405 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 ZCWPW1Q9H0M4 648 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 KIAA1257Q9ULG3 409 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 GMEB1Q9Y692 573 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 CITO14578 2027 aa12.01□□□□□ -0.49
USP35-207ENST00000530546 TRIP11Q15643 1979 aa12□□□□□ -0.49
USP35-207ENST00000530546 TRAFD1O14545 582 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 FGFR1P11362 822 aa12□□□□□ -0.49
USP35-207ENST00000530546 LCP1P13796 627 aa12□□□□□ -0.49
USP35-207ENST00000530546 GSTT1P30711 240 aa12□□□□□ -0.49
USP35-207ENST00000530546 CACNA2D1P54289 1103 aa12□□□□□ -0.49
USP35-207ENST00000530546 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 MYBPC3Q14896 1274 aa12□□□□□ -0.49
USP35-207ENST00000530546 TMED2Q15363 201 aa12□□□□□ -0.49
USP35-207ENST00000530546 ZBTB6Q15916 424 aa12□□□□□ -0.49
USP35-207ENST00000530546 GSTA3Q16772 222 aa12□□□□□ -0.49
USP35-207ENST00000530546 CCDC14Q49A88 953 aa12□□□□□ -0.49
USP35-207ENST00000530546 ANKRD22Q5VYY1 191 aa12□□□□□ -0.49
USP35-207ENST00000530546 VSIG1Q86XK7 387 aa12□□□□□ -0.49
USP35-207ENST00000530546 CMASQ8NFW8 434 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 SPATA18Q8TC71 538 aa12□□□□□ -0.49
USP35-207ENST00000530546 LZICQ8WZA0 190 aa12□□□□□ -0.49
USP35-207ENST00000530546 TGS1Q96RS0 853 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
USP35-207ENST00000530546 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
USP35-207ENST00000530546 MBLAC1A4D2B0 266 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 RBP3P10745 1247 aa12□□□□□ -0.49
USP35-207ENST00000530546 RPL22P35268 128 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 USP4Q13107 963 aa12□□□□□ -0.49
USP35-207ENST00000530546 KPNB1Q14974 876 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 CCDC142Q17RM4 750 aa12□□□□□ -0.49
USP35-207ENST00000530546 FBXO47Q5MNV8 452 aa12□□□□□ -0.49
USP35-207ENST00000530546 ACBD5Q5T8D3 534 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 RNASEH2BQ5TBB1 312 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 SRRM1Q8IYB3 904 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 TRAF3IP1Q8TDR0 691 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 LRRC8CQ8TDW0 803 aa12□□□□□ -0.49
USP35-207ENST00000530546 FAM172AQ8WUF8 416 aa12□□□□□ -0.49
USP35-207ENST00000530546 CCDC77Q9BR77 488 aa12□□□□□ -0.49
USP35-207ENST00000530546 UBQLN1Q9UMX0 589 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 G3BP2Q9UN86 482 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
USP35-207ENST00000530546 MCF2LO15068 1137 aa12□□□□□ -0.49
USP35-207ENST00000530546 PAPSS1O43252 624 aaPredicted RBP12□□□□□ -0.49
USP35-207ENST00000530546 HNRNPCL1O60812 293 aaKnown RBP12□□□□□ -0.49
USP35-207ENST00000530546 GABBR2O75899 941 aa12□□□□□ -0.49
USP35-207ENST00000530546 PIAS1O75925 651 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms