RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 RPS16P62249 146 aaKnown RBP5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 YPEL5P62699 121 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 ID2Q02363 134 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 SLC14A1Q13336 389 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 MFSD13AQ14CX5 517 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 LEXMQ3ZCV2 418 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 TMEM63BQ5T3F8 832 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 VSTM1Q6UX27 236 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 C11orf44Q8N8P7 122 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 EDC3Q96F86 508 aaKnown RBP5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 DHX36Q9H2U1 1008 aaKnown RBP5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 HDAC9Q9UKV0 1011 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 TPCN1Q9ULQ1 816 aa5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 NOB1Q9ULX3 412 aaKnown RBP5.04□□□□□ -1.6
CTHRC1-204ENST00000520880 RAB27BO00194 218 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 CLIC1O00299 241 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 CNOT3O75175 753 aaKnown RBP5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 IL1R1P14778 569 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 ZKSCAN1P17029 563 aaPredicted RBP5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 ACVR2AP27037 513 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 NTSR1P30989 418 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 IGBP1P78318 339 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 STK3Q13188 491 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 CNGA2Q16280 664 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 KLHL22Q53GT1 634 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 ANO7Q6IWH7 933 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 CXorf57Q6NSI4 855 aaKnown RBP5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 USP49Q70CQ1 688 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 C12orf76Q8N812 135 aaPredicted RBP5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 COL20A1Q9P218 1284 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 MID2Q9UJV3 735 aa5.03□□□□□ -1.6
CTHRC1-204ENST00000520880 EPRSP07814 1512 aaKnown RBP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 CDK13Q14004 1512 aaKnown RBP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 A8MVJ9 347 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 CTSAP10619 480 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 SCP2P22307 547 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 CPT1AP50416 773 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 GPC5P78333 572 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 FMO1Q01740 532 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 CC2D1BQ5T0F9 858 aaKnown RBP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 PNPLA1Q8N8W4 532 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 ZNF548Q8NEK5 533 aaPredicted RBP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 CHST8Q9H2A9 424 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 DKK4Q9UBT3 224 aa5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
CTHRC1-204ENST00000520880 SHROOM2Q13796 1616 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 ADCY10Q96PN6 1610 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 PTPN23Q9H3S7 1636 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 NCOA2Q15596 1464 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 FGD6Q6ZV73 1430 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 FAM90A10PA6NDY2 464 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 CD8B2A6NJW9 211 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 FYB1O15117 783 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 TPH1P17752 444 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 CCKARP32238 428 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 RPS13P62277 151 aaKnown RBP5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 KCNAB1Q14722 419 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 SESTD1Q86VW0 696 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 HIC2Q96JB3 615 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 USP29Q9HBJ7 922 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 C1orf112Q9NSG2 853 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 POT1Q9NUX5 634 aa5.01□□□□□ -1.61
CTHRC1-204ENST00000520880 NUP153P49790 1475 aaKnown RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 ABCA8O94911 1581 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 IGKV2D-30A0A075B6S6 120 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 AQP7P3A6NL99 342 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 CA12O43570 354 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 PRAMEF2O60811 474 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 PSG1P11464 419 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 CD19P15391 556 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 MINDY4Q4G0A6 757 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 FAM102BQ5T8I3 360 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 CLEC9AQ6UXN8 241 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 C16orf71Q8IYS4 520 aaPredicted RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 NGDNQ8NEJ9 315 aaKnown RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 ADAMTS15Q8TE58 950 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 HIST1H2AAQ96QV6 131 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 RGS17Q9UGC6 210 aaPredicted RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 STEAP1Q9UHE8 339 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 VPS51Q9UID3 782 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 FZD4Q9ULV1 537 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 MAFFQ9ULX9 164 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 SLC27A6Q9Y2P4 619 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 LRP12Q9Y561 859 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 ZSCAN21Q9Y5A6 473 aaPredicted RBP5□□□□□ -1.61
CTHRC1-204ENST00000520880 MTUS2Q5JR59 1369 aa5□□□□□ -1.61
CTHRC1-204ENST00000520880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5□□□□□ -1.61
CTHRC1-204ENST00000520880 GCC2Q8IWJ2 1684 aa4.99□□□□□ -1.61
CTHRC1-204ENST00000520880 ITSN2Q9NZM3 1697 aa4.99□□□□□ -1.61
CTHRC1-204ENST00000520880 MYOM3Q5VTT5 1437 aa4.99□□□□□ -1.61
CTHRC1-204ENST00000520880 CCDC187A0A096LP49 1063 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms