RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 DDX1Q92499 740 aaKnown RBP11.19□□□□□ -0.62
UBR4-208ENST00000459947 FAM149B1Q96BN6 582 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
UBR4-208ENST00000459947 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 APOEP02649 317 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 CYBBP04839 570 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 MYBL1P10243 752 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 GZMAP12544 262 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 GPC5P78333 572 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 KLHL30Q0D2K2 578 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 FBXO43Q4G163 708 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBR4-208ENST00000459947 CPXM2Q8N436 756 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 BAP1Q92560 729 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 TRANK1O15050 2925 aa11.19□□□□□ -0.62
UBR4-208ENST00000459947 SERPING1P05155 500 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 CENPCQ03188 943 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 GRM2Q14416 872 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 CLEC16AQ2KHT3 1053 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
UBR4-208ENST00000459947 TTYH3Q9C0H2 523 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 CCSER2Q9H7U1 834 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 NMUR1Q9HB89 426 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 TYW5A2RUC4 315 aaKnown RBP11.18□□□□□ -0.62
UBR4-208ENST00000459947 E5RJQ4 531 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 NOS2P35228 1153 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 SLC11A2P49281 568 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 KLK7P49862 253 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 EFEMP1Q12805 493 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 FEZF2Q8TBJ5 459 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 PBXIP1Q96AQ6 731 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 SLC2A13Q96QE2 648 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
UBR4-208ENST00000459947 MARK1Q9P0L2 795 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 KANSL1LA0AUZ9 987 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 IRAK2O43187 625 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 CFHP08603 1231 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 APBA1Q02410 837 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 TAF3Q5VWG9 929 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
UBR4-208ENST00000459947 VSTM4Q8IW00 320 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 TRIM5Q9C035 493 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 PIAS3Q9Y6X2 628 aa11.18□□□□□ -0.62
UBR4-208ENST00000459947 FMO1Q01740 532 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 EML3Q32P44 896 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 HSF5Q4G112 596 aaPredicted RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 TPRG1Q6ZUI0 275 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 ATP6V0D2Q8N8Y2 350 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 MRFAP1L1Q96HT8 127 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 TBC1D17Q9HA65 648 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 DRD1P21728 446 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 SIX5Q8N196 739 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 ASIC4Q96FT7 647 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 RNF38Q9H0F5 515 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 ECT2Q9H8V3 914 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 SEPT11Q9NVA2 429 aaKnown RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.62
UBR4-208ENST00000459947 TLR6Q9Y2C9 796 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 DOCK6Q96HP0 2047 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 E7ENQ6 273 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 EPHB6O15197 1021 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 HOXC11O43248 304 aaPredicted RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 NCAM1P13591 858 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 RPS9P46781 194 aaKnown RBP11.17□□□□□ -0.62
UBR4-208ENST00000459947 OXCT1P55809 520 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 TBX4P57082 545 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 NAA35Q5VZE5 725 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 RSPRY1Q96DX4 576 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 COL4A2P08572 1712 aa11.17□□□□□ -0.62
UBR4-208ENST00000459947 TULP2O00295 520 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 ARNTLO00327 626 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 NARSO43776 548 aaKnown RBP11.16□□□□□ -0.62
UBR4-208ENST00000459947 MMEP08473 750 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 MMP8P22894 467 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 HNRNPH3P31942 346 aaKnown RBP11.16□□□□□ -0.62
UBR4-208ENST00000459947 PTPN20Q4JDL3 420 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 BRMS1LQ5PSV4 323 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 ACAD10Q6JQN1 1059 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 BHLHA9Q7RTU4 235 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 OR8K1Q8NGG5 319 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 FAM3CQ92520 227 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
UBR4-208ENST00000459947 CPXM1Q96SM3 734 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 RETREG1Q9H6L5 497 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 LTB4R2Q9NPC1 389 aa11.16□□□□□ -0.62
UBR4-208ENST00000459947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms