RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 RNF139Q8WU17 664 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 BBS2Q9BXC9 721 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 POLR3BQ9NW08 1133 aaPredicted RBP14.43□□□□□ -0.1
CXCL12-205ENST00000395794 EBF1Q9UH73 591 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 MMP17Q9ULZ9 603 aa14.43□□□□□ -0.1
CXCL12-205ENST00000395794 A0A0A0MRY4 1105 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 NEDD8-MDP1E9PL57 170 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 FOXD2O60548 495 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 TULP3O75386 442 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 HMBSP08397 361 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 TYRP14679 529 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 HOXC13P31276 330 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 MARSP56192 900 aaKnown RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 FOXK2Q01167 660 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 GCNT1Q02742 428 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 ELF2Q15723 593 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 USP39Q53GS9 565 aaKnown RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 GRAMD4Q6IC98 578 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 LCLAT1Q6UWP7 414 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 TPGS1Q6ZTW0 290 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 RRAGAQ7L523 313 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 C11orf74Q86VG3 221 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 C12orf40Q86WS4 652 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 ALLCQ8N6M5 410 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 MLKLQ8NB16 471 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 WBP2Q969T9 261 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 LOXL4Q96JB6 756 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 ULBP1Q9BZM6 244 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 POLMQ9NP87 494 aaPredicted RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 OLA1Q9NTK5 396 aaKnown RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 DNAJC17Q9NVM6 304 aaKnown RBP14.42□□□□□ -0.1
CXCL12-205ENST00000395794 MARCH2Q9P0N8 246 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 FAM186AA6NE01 2351 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 FRYLO94915 3013 aa14.42□□□□□ -0.1
CXCL12-205ENST00000395794 O00370 1275 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ZBTB24O43167 697 aaPredicted RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 STC2O76061 302 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 KLF8O95600 359 aaPredicted RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 CHKAP35790 457 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ADIGQ0VDE8 80 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 CNGA2Q16280 664 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 CRY1Q16526 586 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 C10orf76Q5T2E6 689 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 PM20D1Q6GTS8 502 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 SDE2Q6IQ49 451 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ANO7Q6IWH7 933 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ERMP1Q7Z2K6 904 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ETFBKMTQ8IXQ9 262 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 UBR7Q8N806 425 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 TXNDC5Q8NBS9 432 aaKnown RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 RBBP8NLQ8NC74 664 aaPredicted RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 KCTD13Q8WZ19 329 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 GOLGA1Q92805 767 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 RMDN1Q96DB5 314 aa14.41□□□□□ -0.1
CXCL12-205ENST00000395794 INTS2Q9H0H0 1204 aaKnown RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 CDV3Q9UKY7 258 aaKnown RBP14.41□□□□□ -0.1
CXCL12-205ENST00000395794 ZNF292O60281 2723 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 SLC12A8A0AV02 714 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 M0QYV0 167 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 TULP2O00295 520 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 CACNG3O60359 315 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 GREM1O60565 184 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 RHOBTB1O94844 696 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 CYBBP04839 570 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 KRT5P13647 590 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 LCP1P13796 627 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 CORO1AP31146 461 aaKnown RBP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 GBP1P32455 592 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 CSRP2Q16527 193 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 RSPO4Q2I0M5 234 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 ENOSF1Q7L5Y1 443 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 KBTBD6Q86V97 674 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 ZNF513Q8N8E2 541 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 TERB1Q8NA31 727 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 IL17RCQ8NAC3 791 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 FAM81BQ96LP2 452 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 UBE2TQ9NPD8 197 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 MARK1Q9P0L2 795 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
CXCL12-205ENST00000395794 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.4□□□□□ -0.1
CXCL12-205ENST00000395794 MED7O43513 233 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 BRD2P25440 801 aaKnown RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 KIR2DL1P43626 348 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 HARS2P49590 506 aaKnown RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 DGKGP49619 791 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 MFAP3P55082 362 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 BSPRYQ5W0U4 402 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 Q6ZNB5 142 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 DGLUCYQ7Z3D6 616 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 DENND1CQ8IV53 801 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms