RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 COG7P83436 770 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PDE4CQ08493 712 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 BST2Q10589 180 aaKnown RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 CNGA2Q16280 664 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 C10orf120Q5SQS8 335 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 BTBD8Q5XKL5 378 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
CCDC9-203ENST00000596938 LAIR1Q6GTX8 287 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 LCLAT1Q6UWP7 414 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PPM1KQ8N3J5 372 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 DCLK2Q8N568 766 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 RPLP0P6Q8NHW5 317 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 USP33Q8TEY7 942 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 KCTD13Q8WZ19 329 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 WBP2Q969T9 261 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 ACDQ96AP0 544 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 MED15Q96RN5 788 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 TSPAN16Q9UKR8 245 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 CNTN6Q9UQ52 1028 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
CCDC9-203ENST00000596938 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 APODP05090 189 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 SETSIPP0DME0 302 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 CD19P15391 556 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 TKTL1P51854 596 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 YWHAGP61981 247 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 SIM2Q14190 667 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 STILQ15468 1287 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 GOLGA7BQ2TAP0 167 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 HSF5Q4G112 596 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 Q6ZNB5 142 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 ETFBKMTQ8IXQ9 262 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 SCML4Q8N228 414 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 SLC35F5Q8WV83 523 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 TFAP2BQ92481 460 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 HINFPQ9BQA5 517 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 CLSTN2Q9H4D0 955 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 ARHGEF4Q9NR80 690 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 WDR35Q9P2L0 1181 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 DEC1Q9P2X7 70 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 NCDNQ9UBB6 729 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 EBF1Q9UH73 591 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 LSM7Q9UK45 103 aaKnown RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 NUDT5Q9UKK9 219 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 RAB23Q9ULC3 237 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 KIF26AQ9ULI4 1882 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 ZNF510Q9Y2H8 683 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 GREB1Q4ZG55 1949 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 DENND4CQ5VZ89 1909 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 EP300Q09472 2414 aaPredicted RBP11.05□□□□□ -0.64
CCDC9-203ENST00000596938 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
CCDC9-203ENST00000596938 FAM186AA6NE01 2351 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 TULP2O00295 520 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 STC2O76061 302 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 KAT7O95251 611 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 APBB3O95704 486 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 RETP07949 1114 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 IRF1P10914 325 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
CCDC9-203ENST00000596938 TGM1P22735 817 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 HOXC13P31276 330 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 ZNF132P52740 706 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 MESP2Q0VG99 397 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 DMC1Q14565 340 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 RRAGAQ7L523 313 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 ENOSF1Q7L5Y1 443 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 BHLHA9Q7RTU4 235 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 IRF2BP1Q8IU81 584 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 KIAA2013Q8IYS2 634 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 PHTF2Q8N3S3 785 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 UBA3Q8TBC4 463 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 KAT5Q92993 513 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 KREMEN1Q96MU8 473 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 DCLK3Q9C098 648 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
CCDC9-203ENST00000596938 LRRC4Q9HBW1 653 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 CNGB3Q9NQW8 809 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 POLR3BQ9NW08 1133 aaPredicted RBP11.04□□□□□ -0.64
CCDC9-203ENST00000596938 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 GMEB2Q9UKD1 530 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 MMP17Q9ULZ9 603 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 OBSL1O75147 1896 aa11.04□□□□□ -0.64
CCDC9-203ENST00000596938 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 PATJQ8NI35 1801 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 TBC1D3BA6NDS4 549 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 MDM4O15151 490 aa11.03□□□□□ -0.64
CCDC9-203ENST00000596938 AXIN1O15169 862 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms