RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NOX5Q96PH1 765 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 PDCL3Q9H2J4 239 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 ST7Q9NRC1 585 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 ABCC13Q9NSE7 274 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 FAM207AQ9NSI2 230 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 OSER1Q9NX31 292 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 LSM7Q9UK45 103 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 STRIP2Q9ULQ0 834 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 PCDHGC3Q9UN70 934 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 WNT6Q9Y6F9 365 aa18.14■□□□□ 0.49
SHKBP1-212ENST00000596163 SPECC1L-ADORA2AF8WAN1 911 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 TBX18O95935 607 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 ATP1A3P13637 1013 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 CLCN1P35523 988 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 DAOAP59103 153 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 POLR2FP61218 127 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 ZXDBP98169 803 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 EML3Q32P44 896 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 TMEM105Q8N8V8 129 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 TTC8Q8TAM2 541 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 RIN3Q8TB24 985 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 SPAG5Q96R06 1193 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 KLF16Q9BXK1 252 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 FOXQ1Q9C009 403 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 GANQ9H2C0 597 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 LHX5Q9H2C1 402 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 ECT2Q9H8V3 914 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 HPS4Q9NQG7 708 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 AJAP1Q9UKB5 411 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 SIK3Q9Y2K2 1263 aa18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 ARIH1Q9Y4X5 557 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-212ENST00000596163 PI15O43692 258 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 ARSAP15289 507 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 CD72P21854 359 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 CTHP32929 405 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 RPL34P49207 117 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 BSPRYQ5W0U4 402 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 APTXQ7Z2E3 356 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 SLC47A2Q86VL8 602 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 ZFRQ96KR1 1074 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 SLC4A5Q9BY07 1137 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 DCLK3Q9C098 648 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 IRF2BPLQ9H1B7 796 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 LINC00597Q9H2U6 94 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 ACP6Q9NPH0 428 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 ZNF510Q9Y2H8 683 aa18.12■□□□□ 0.49
SHKBP1-212ENST00000596163 F8VZ95 297 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 SERPINC1P01008 464 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 IRF1P10914 325 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 TARSP26639 723 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 STAT1P42224 750 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 EFEMP1Q12805 493 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 LRRC32Q14392 662 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 HTR3DQ70Z44 454 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 TMEM110Q86TL2 294 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 CCDC105Q8IYK2 499 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 ADGRG2Q8IZP9 1017 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 MARCH2Q9P0N8 246 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 RASAL2Q9UJF2 1139 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 NUDT5Q9UKK9 219 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 NDRG2Q9UN36 371 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 DENND4CQ5VZ89 1909 aa18.11■□□□□ 0.49
SHKBP1-212ENST00000596163 MYH10P35580 1976 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 YJEFN3A6XGL0 299 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 E7ENQ6 273 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 GALR2O43603 387 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 ADH1CP00326 375 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 DCNP07585 359 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 CYP11B1P15538 503 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 RPS9P46781 194 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 SOX9P48436 509 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 KLK7P49862 253 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 DGKKQ5KSL6 1271 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 CACNA2D4Q7Z3S7 1137 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 ZNF677Q86XU0 584 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 MIB1Q86YT6 1006 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 DTWD2Q8NBA8 298 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 CLDN23Q96B33 292 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 IER2Q9BTL4 223 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 MIS12Q9H081 205 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 NLRC4Q9NPP4 1024 aa18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 ZNF638Q14966 1978 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-212ENST00000596163 OBSL1O75147 1896 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 PIK3R2O00459 728 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 LTFP02788 710 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 CCDC172P0C7W6 258 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 PNMA6AP0CW24 399 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 GJA4P35212 333 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 SOX5P35711 763 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 GRSF1Q12849 480 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 PDCLQ13371 301 aa18.09■□□□□ 0.49
SHKBP1-212ENST00000596163 BHLHA9Q7RTU4 235 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms