RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PLEKHO2Q8TD55 490 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SMARCD1Q96GM5 515 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SPACA7Q96KW9 195 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 CLSTN2Q9H4D0 955 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SMYD3Q9H7B4 428 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 DMAP1Q9NPF5 467 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 TMEM9BQ9NQ34 198 aa18.56■□□□□ 0.56
SHKBP1-203ENST00000594298 SLC16A3O15427 465 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 ADAM23O75077 832 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 CSRP1P21291 193 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 GTF2H1P32780 548 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 DHPSP49366 369 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 CDH8P55286 799 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 ZNF699Q32M78 642 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 PREPLQ4J6C6 727 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 ZNF667Q5HYK9 610 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 EMC10Q5UCC4 262 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 LPCAT2Q7L5N7 544 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 TTC30AQ86WT1 665 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 SCAMP5Q8TAC9 235 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 CHORDC1Q9UHD1 332 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 SH3BP1Q9Y3L3 701 aa18.55■□□□□ 0.56
SHKBP1-203ENST00000594298 PATE3B3GLJ2 98 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 PPP1R3GB7ZBB8 358 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 CLSTN1O94985 981 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 P4HA1P13674 534 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 CEACAM1P13688 526 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 DPP6P42658 865 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 DLG4P78352 724 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 IRX4P78413 519 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 KDSRQ06136 332 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 NCOA4Q13772 614 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 BYSLQ13895 437 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 SGSM1Q2NKQ1 1148 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 ZACNQ401N2 412 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 SH3PXD2AQ5TCZ1 1133 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 BTBD8Q5XKL5 378 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 SV2AQ7L0J3 742 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 TRMT11Q7Z4G4 463 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 FUKQ8N0W3 1084 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 NELFBQ8WX92 580 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 RLN3Q8WXF3 142 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 PIGKQ92643 395 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 TAF4BQ92750 862 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 MED10Q9BTT4 135 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 NUP62CLQ9H1M0 184 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 CCSER2Q9H7U1 834 aa18.54■□□□□ 0.56
SHKBP1-203ENST00000594298 GIPC1O14908 333 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 TULP3O75386 442 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 MCCD1P59942 119 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 LMAN2Q12907 356 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 BBS7Q8IWZ6 715 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 CCDC150Q8NCX0 1101 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 ZMIZ2Q8NF64 920 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 IMPG2Q9BZV3 1241 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 SDCBP2Q9H190 292 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 METTL14Q9HCE5 456 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 CSNK1G1Q9HCP0 422 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 SPHK2Q9NRA0 654 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 GMIPQ9P107 970 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 BCCIPQ9P287 314 aaKnown RBP eCLIP18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 DEC1Q9P2X7 70 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 MBD1Q9UIS9 605 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 WASF3Q9UPY6 502 aa18.53■□□□□ 0.56
SHKBP1-203ENST00000594298 CNOT1A5YKK6 2376 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TCRBV21S2A2A0A5A6 115 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TBC1D3BA6NDS4 549 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 MAP3K13O43283 966 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 AP1G2O75843 785 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 VNN1O95497 513 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 FGFR1OPO95684 399 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 PROS1P07225 676 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 BMP6P22004 513 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 HOXD12P35452 270 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 ZNF252P-AS1Q0IIN9 211 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 PAK1Q13153 545 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TRIM61Q5EBN2 209 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 PEAR1Q5VY43 1037 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 NUDT18Q6ZVK8 323 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TMEFF1Q8IYR6 380 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 CRYBG2Q8N1P7 616 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TERB1Q8NA31 727 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 HMGB4Q8WW32 186 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 SMOQ99835 787 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 FBXO44Q9H4M3 255 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 KRT82Q9NSB4 513 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 ARMCX3Q9UH62 379 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 STARD13Q9Y3M8 1113 aa18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 MAP1BP46821 2468 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-203ENST00000594298 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms