RNA–Protein interactions for RNA: ENST00000588826.2

RAD23A-205, Transcript of RAD23 homolog A, nucleotide excision repair protein, human

TSL 5

Gene RAD23A, Length 832 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD23A-205	ENST00000588826	ASPM	Q8IZT6	3477 aa		13.9	□□□□□ -0.18
RAD23A-205	ENST00000588826	ADAMTS9	Q9P2N4	1935 aa		13.9	□□□□□ -0.18
RAD23A-205	ENST00000588826	CFAP47	Q6ZTR5	3102 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	TULP3	O75386	442 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	KIF20A	O95235	890 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	ASS1	P00966	412 aa	Known RBP	13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	NOVA1	P51513	510 aa	Known RBP	13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	SHC2	P98077	582 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	C10orf76	Q5T2E6	689 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	EMC10	Q5UCC4	262 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	ARMCX6	Q7L4S7	300 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	ETFBKMT	Q8IXQ9	262 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	CRYBG2	Q8N1P7	616 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	PHTF2	Q8N3S3	785 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	TERB1	Q8NA31	727 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	ZMIZ2	Q8NF64	920 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	TMC2	Q8TDI7	906 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	KCNV2	Q8TDN2	545 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	RLN3	Q8WXF3	142 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	CCDC47	Q96A33	483 aa	Known RBP	13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	SMO	Q99835	787 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	DNAI2	Q9GZS0	605 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	CSNK1G1	Q9HCP0	422 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	HMGXB4	Q9UGU5	601 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	USP25	Q9UHP3	1055 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	LSM7	Q9UK45	103 aa	Known RBP	13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	RCOR1	Q9UKL0	485 aa		13.89	□□□□□ -0.19
RAD23A-205	ENST00000588826	GOLGA6L4	A6NEF3	574 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	PATE3	B3GLJ2	98 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	IKBKB	O14920	756 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	ADAM23	O75077	832 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	BEST1	O76090	585 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	CHRM1	P11229	460 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	PFKFB1	P16118	471 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	ADORA2B	P29275	332 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	ATP5C1	P36542	298 aa	Known RBP	13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	DPP6	P42658	865 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	ASPA	P45381	313 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	LMAN2	Q12907	356 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	SPDYC	Q5MJ68	293 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	SPOPL	Q6IQ16	392 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	SV2A	Q7L0J3	742 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	TMEM25	Q86YD3	366 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	C12orf29	Q8N999	325 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	JAKMIP2	Q96AA8	810 aa		13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	XPO6	Q96QU8	1125 aa	Known RBP	13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	NUSAP1	Q9BXS6	441 aa	Known RBP	13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	EVL	Q9UI08	416 aa	Predicted RBP	13.88	□□□□□ -0.19
RAD23A-205	ENST00000588826	IGF2R	P11717	2491 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826		A0A1B0GVL5	298 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	NEDD8-MDP1	E9PL57	170 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	ZBTB24	O43167	697 aa	Predicted RBP	13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	HLA-DRA	P01903	254 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	HOXB2	P14652	356 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	NR2F2	P24468	414 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	VAMP7	P51809	220 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	ZNF252P-AS1	Q0IIN9	211 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	TRIM61	Q5EBN2	209 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	SH3PXD2A	Q5TCZ1	1133 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	LYSMD4	Q5XG99	296 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	GRAMD4	Q6IC98	578 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	HTR3D	Q70Z44	454 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	INTS8	Q75QN2	995 aa	Known RBP	13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	SYT12	Q8IV01	421 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	TMEFF1	Q8IYR6	380 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	CCDC150	Q8NCX0	1101 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	BBS2	Q9BXC9	721 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	NT5C1A	Q9BXI3	368 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	PNPLA8	Q9NP80	782 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	CYLD	Q9NQC7	956 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	2e-16	■■■■■ 47.4
RAD23A-205	ENST00000588826	DNAJC17	Q9NVM6	304 aa	Known RBP	13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	SCML2	Q9UQR0	700 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	PCDHA5	Q9Y5H7	936 aa		13.87	□□□□□ -0.19
RAD23A-205	ENST00000588826	WDFY3	Q8IZQ1	3526 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	MAPK13	O15264	365 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	CYP26A1	O43174	497 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	AP5Z1	O43299	807 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	TBX18	O95935	607 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	KRT13	P13646	458 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	ACO1	P21399	889 aa	Known RBP	13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	CMA1	P23946	247 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	NTSR1	P30989	418 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	PTGER3	P43115	390 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	IRX4	P78413	519 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	INCA1	Q0VD86	236 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	MAP7D1	Q3KQU3	841 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	UAP1L1	Q3KQV9	507 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	SDE2	Q6IQ49	451 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	CLEC20A	Q6ZU45	233 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	GPRIN1	Q7Z2K8	1008 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	CHPF	Q8IZ52	775 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	FRMD1	Q8N878	549 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	WBP2	Q969T9	261 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	CYFIP2	Q96F07	1278 aa		13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	HNRNPAB	Q99729	332 aa	Known RBP	13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	KLF16	Q9BXK1	252 aa	Predicted RBP	13.86	□□□□□ -0.19
RAD23A-205	ENST00000588826	NIF3L1	Q9GZT8	377 aa		13.86	□□□□□ -0.19

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