RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 DNMT3LQ9UJW3 386 aa22.57■■□□□ 1.2
PPP4R1-228ENST00000584074 P4HA2O15460 535 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 CNR2P34972 360 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 MARSP56192 900 aaKnown RBP22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 PDE4CQ08493 712 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 CETN1Q12798 172 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 TMEM270Q6UE05 265 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 SYT13Q7L8C5 426 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 NAT16Q8N8M0 369 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 USP33Q8TEY7 942 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 SPHK2Q9NRA0 654 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 CLIC5Q9NZA1 410 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 RAB23Q9ULC3 237 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 PCDHB4Q9Y5E5 795 aa22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.56■■□□□ 1.2
PPP4R1-228ENST00000584074 AFPP02771 609 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 VDRP11473 427 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 EIF2DP41214 584 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 TKTL1P51854 596 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 BCAT1P54687 386 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 GAD2Q05329 585 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 KDSRQ06136 332 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 GOLGA8FQ08AF8 430 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 GOLGA8DPQ0D2H9 430 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 DMC1Q14565 340 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 RRAGAQ7L523 313 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 MIB1Q86YT6 1006 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 ARHGEF19Q8IW93 802 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 ZNF276Q8N554 614 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 CAMKK1Q8N5S9 505 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 EHBP1Q8NDI1 1231 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 UBA3Q8TBC4 463 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 TFAP2BQ92481 460 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 SECISBP2LQ93073 1101 aaKnown RBP22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 ACDQ96AP0 544 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 MED15Q96RN5 788 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 ARHGEF4Q9NR80 690 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 HESX1Q9UBX0 185 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 RWDD2AQ9UIY3 292 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 KIAA1257Q9ULG3 409 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 MYH10P35580 1976 aa22.55■■□□□ 1.2
PPP4R1-228ENST00000584074 MYO16Q9Y6X6 1858 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 RNF225M0QZC1 329 aaPredicted RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 O00370 1275 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 XPO1O14980 1071 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 HOXC11O43248 304 aaPredicted RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 KAT7O95251 611 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 RALAP11233 206 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 ANP32AP39687 249 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 PLA2G4AP47712 749 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 ANO4Q32M45 955 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 LAIR1Q6GTX8 287 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 TADA2BQ86TJ2 420 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 CCDC26Q8TAB7 109 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 NDRG1Q92597 394 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 ULBP1Q9BZM6 244 aa22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 LSM7Q9UK45 103 aaKnown RBP22.54■■□□□ 1.2
PPP4R1-228ENST00000584074 DCHS1Q96JQ0 3298 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 CCDC163A0A0D9SF12 145 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 FGFR1OPO95684 399 aaKnown RBP22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 ZBED1O96006 694 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 CALCAP01258 141 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 APODP05090 189 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 PAEPP09466 180 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 CCDC192P0DO97 292 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 GRIA2P42262 883 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 BST2Q10589 180 aaKnown RBP22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 EFEMP1Q12805 493 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 BTBD8Q5XKL5 378 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 PM20D1Q6GTS8 502 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 CEP68Q76N32 757 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 ETFBKMTQ8IXQ9 262 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 PHTF2Q8N3S3 785 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 CCDC33Q8N5R6 958 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 ZSWIM1Q9BR11 485 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 INTS2Q9H0H0 1204 aaKnown RBP22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 GMEB2Q9UKD1 530 aa22.53■■□□□ 1.2
PPP4R1-228ENST00000584074 A0A0A0MRY4 1105 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 STC2O76061 302 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 YWHAGP61981 247 aaKnown RBP eCLIP22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 ADIGQ0VDE8 80 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 EMC10Q5UCC4 262 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 LCLAT1Q6UWP7 414 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 BHLHA9Q7RTU4 235 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 ARHGAP18Q8N392 663 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 KREMEN1Q96MU8 473 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 CDK5RAP1Q96SZ6 601 aaKnown RBP22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 CLSTN2Q9H4D0 955 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 LRRC4Q9HBW1 653 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 RASAL2Q9UJF2 1139 aa22.52■■□□□ 1.2
PPP4R1-228ENST00000584074 TRIM24O15164 1050 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 TULP3O75386 442 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 RPP40O75818 363 aaKnown RBP22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 APBB3O95704 486 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 KLKB1P03952 638 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 HMBSP08397 361 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 SETSIPP0DME0 302 aa22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 CHRM1P11229 460 aaPredicted RBP22.51■■□□□ 1.19
PPP4R1-228ENST00000584074 TGM1P22735 817 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms