RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 PCDHGA2Q9Y5H1 932 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 M0QYV0 167 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 PIK3R2O00459 728 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ATG13O75143 517 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ZBED1O96006 694 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 HMBSP08397 361 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ADH5P11766 374 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 LCP1P13796 627 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 SLC9A1P19634 815 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 USP8P40818 1118 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 OPRD1P41143 372 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 PLA2G4AP47712 749 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 SLC6A11P48066 632 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 RGS7P49802 495 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 NRLP54845 237 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 YWHAGP61981 247 aaKnown RBP eCLIP17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ADIGQ0VDE8 80 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ARHGAP44Q17R89 818 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ANO4Q32M45 955 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 RAB41Q5JT25 222 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 GJB7Q6PEY0 223 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 LCLAT1Q6UWP7 414 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 FAM114A1Q8IWE2 563 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 SIX6OS1Q8N1H7 587 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 ARHGAP18Q8N392 663 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 NAT16Q8N8M0 369 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 CLIC5Q9NZA1 410 aa17.47■□□□□ 0.39
SREBF1-219ENST00000580540 MYOFQ9NZM1 2061 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 CHURC1-FNTBB4DL54 471 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 PES1O00541 588 aaKnown RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 SETSIPP0DME0 302 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 ERCC5P28715 1186 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 HOXC13P31276 330 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 FNTBP49356 437 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 MFAP3P55082 362 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 SEC13P55735 322 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 APBA1Q02410 837 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 GAD2Q05329 585 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 CNGA2Q16280 664 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 EXOC3L4Q17RC7 722 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 GAB4Q2WGN9 574 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 FBXO43Q4G163 708 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 BTBD8Q5XKL5 378 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 KLHDC10Q6PID8 442 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 TRIM65Q6PJ69 517 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 ZBTB44Q8NCP5 570 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 RPLP0P6Q8NHW5 317 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 OTUB2Q96DC9 234 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 CDK5RAP1Q96SZ6 601 aaKnown RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 HINFPQ9BQA5 517 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 ZSWIM1Q9BR11 485 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 FAM126AQ9BYI3 521 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 POLR3BQ9NW08 1133 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.46■□□□□ 0.39
SREBF1-219ENST00000580540 SLC8A2Q9UPR5 921 aa17.46■□□□□ 0.39
SREBF1-219ENST00000580540 PTPRZ1P23471 2315 aaPredicted RBP17.46■□□□□ 0.38
SREBF1-219ENST00000580540 TDGF1P13385 188 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 KDSRQ06136 332 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 DMWDQ09019 674 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 STILQ15468 1287 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 C2orf27AQ580R0 203 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 HTR3DQ70Z44 454 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 C12orf40Q86WS4 652 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 TMEM25Q86YD3 366 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 EZH1Q92800 747 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-219ENST00000580540 PNKPQ96T60 521 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 SPHK2Q9NRA0 654 aa17.45■□□□□ 0.38
SREBF1-219ENST00000580540 SLC12A8A0AV02 714 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 K7ESF4 209 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 LETM1O95202 739 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-219ENST00000580540 APODP05090 189 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 PXNP49023 591 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-219ENST00000580540 ZNF132P52740 706 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 COG7P83436 770 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 PKDCCQ504Y2 493 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 PMF1Q6P1K2 205 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 TPGS1Q6ZTW0 290 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 RNF139Q8WU17 664 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 SLC35F5Q8WV83 523 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 KCTD13Q8WZ19 329 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 NELL1Q92832 810 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 ARHGEF4Q9NR80 690 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 SAMSN1Q9NSI8 373 aaKnown RBP17.44■□□□□ 0.38
SREBF1-219ENST00000580540 MARCH2Q9P0N8 246 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 STRIP2Q9ULQ0 834 aa17.44■□□□□ 0.38
SREBF1-219ENST00000580540 RIF1Q5UIP0 2472 aaKnown RBP17.44■□□□□ 0.38
SREBF1-219ENST00000580540 MYO15AQ9UKN7 3530 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 KCNJ18B7U540 433 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 THAP12O43422 761 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 STC2O76061 302 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 KAT7O95251 611 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 PON1P27169 355 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 KCNJ12Q14500 433 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 VWA3BQ502W6 1294 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 PRR23BQ6ZRT6 265 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms