RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 BTBD8Q5XKL5 378 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 BEND5Q7L4P6 421 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 ARCQ7LC44 396 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 SMRP1Q8NCR6 262 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 FAM149B1Q96BN6 582 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 TCEAL4Q96EI5 215 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 GCNAQ96QF7 691 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 ATXN3LQ9H3M9 355 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 POPDC2Q9HBU9 364 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 MRPL47Q9HD33 250 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 ABCC13Q9NSE7 274 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 SCINQ9Y6U3 715 aa16.66■□□□□ 0.26
CSNK1D-212ENST00000580061 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 H3BQ06 376 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 PJA2O43164 708 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 DAB1O75553 588 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 ABL1P00519 1130 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 CCDC175P0C221 793 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 RARGP13631 454 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 GJA1P17302 382 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 CYP4F8P98187 520 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 CLUL1Q15846 466 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 ZNF276Q8N554 614 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 JOSD2Q8TAC2 188 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 MRPS31Q92665 395 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 SLC2A13Q96QE2 648 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 TRIM62Q9BVG3 475 aa16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 WDR6Q9NNW5 1121 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 MRPS23Q9Y3D9 190 aaKnown RBP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
CSNK1D-212ENST00000580061 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.26
CSNK1D-212ENST00000580061 C5orf42Q9H799 3197 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 RALAP11233 206 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 KCNA5P22460 613 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 RFC1P35251 1148 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 FLT3P36888 993 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 MTHFRP42898 656 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 TUBP50607 506 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 RPL7AP62424 266 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 TCEAL1Q15170 157 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 TEAD2Q15562 447 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 DEFB106AQ8N104 65 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 TXLNBQ8N3L3 684 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 EMC1Q8N766 993 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 ITFG1Q8TB96 612 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 EDEM1Q92611 657 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 HLA-CQ95604 372 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 MCEEQ96PE7 176 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 NUP85Q9BW27 656 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 NUP210Q8TEM1 1887 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 PRUNE2Q8WUY3 3088 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 CLUHO75153 1309 aa16.64■□□□□ 0.25
CSNK1D-212ENST00000580061 A0A0U1RQJ8 604 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 TMEM191CA6NGB0 347 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 C2CD4BA6NLJ0 364 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 CAPN9O14815 690 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 TLR5O60602 858 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 NCAM1P13591 858 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 FSHRP23945 695 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 NOS2P35228 1153 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 MATKP42679 507 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 DCAF6Q58WW2 860 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 HECTD3Q5T447 861 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 RHOT2Q8IXI1 618 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 ATRIPQ8WXE1 791 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 RFFLQ8WZ73 363 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 SUSD6Q92537 303 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 CCSER2Q9H7U1 834 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 OSGEPQ9NPF4 335 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 CTTNBP2NLQ9P2B4 639 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 UVRAGQ9P2Y5 699 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 NUDT5Q9UKK9 219 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 COG5Q9UP83 839 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 DOCK8Q8NF50 2099 aa16.63■□□□□ 0.25
CSNK1D-212ENST00000580061 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 C2orf78A6NCI8 922 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 SOBPA7XYQ1 873 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 BTNL10A8MVZ5 291 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 MTA2O94776 668 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 OLFM2O95897 454 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 CEBPBP17676 345 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 PFKLP17858 780 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms