RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 ZNF212Q9UDV6 495 aa5.56□□□□□ -1.52
UBE2D3-218ENST00000505009 VPS51Q9UID3 782 aa5.56□□□□□ -1.52
UBE2D3-218ENST00000505009 CAPN11Q9UMQ6 739 aa5.56□□□□□ -1.52
UBE2D3-218ENST00000505009 CORO2BQ9UQ03 480 aa5.56□□□□□ -1.52
UBE2D3-218ENST00000505009 TMEM232C9JQI7 657 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 E5RJQ4 531 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 ADAM10O14672 748 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 SNX2O60749 519 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 A1BGP04217 495 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 FHL3Q13643 280 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 RABEP1Q15276 862 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 ST3GAL2Q16842 350 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 RRAGBQ5VZM2 374 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 ZNF813Q6ZN06 617 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 DCDC5Q6ZRR9 648 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 DGKHQ86XP1 1220 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 FMNL3Q8IVF7 1028 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 NAF1Q96HR8 494 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 BRIP1Q9BX63 1249 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 ELOVL5Q9NYP7 299 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 MAFFQ9ULX9 164 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 HPSEQ9Y251 543 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 SLC27A6Q9Y2P4 619 aa5.55□□□□□ -1.52
UBE2D3-218ENST00000505009 A8MVJ9 347 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 CA12O43570 354 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 HTR7P34969 479 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 MMP13P45452 471 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 MEX3CQ5U5Q3 659 aaKnown RBP5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 ZNF366Q8N895 744 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 ZNF398Q8TD17 642 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 PHKBQ93100 1093 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 EDC3Q96F86 508 aaKnown RBP5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 ZDHHC12Q96GR4 267 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 KAZALD1Q96I82 304 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 VPS50Q96JG6 964 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 PCGF6Q9BYE7 350 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 PNPLA8Q9NP80 782 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 GAR1Q9NY12 217 aaKnown RBP5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 DNAJB11Q9UBS4 358 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 STEAP1Q9UHE8 339 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 SNX13Q9Y5W8 968 aa5.54□□□□□ -1.52
UBE2D3-218ENST00000505009 A0A087WZ62 844 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 PPEF2O14830 753 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 ANXA2P07355 339 aaKnown RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 HOXD9P28356 352 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 COPAP53621 1224 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 HLTFQ14527 1009 aaKnown RBP eCLIP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 KCNB1Q14721 858 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 CLCA4Q14CN2 919 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 RNF44Q7L0R7 432 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 MAP4K1Q92918 833 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 HS6ST2Q96MM7 605 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 FCRL4Q96PJ5 515 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 FAM118BQ9BPY3 351 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 TUBA8Q9NY65 449 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-218ENST00000505009 H3BNC9 293 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 CLIC1O00299 241 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 DSCR3O14972 297 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 THAP12O43422 761 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 PRAMEF2O60811 474 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 RNF8O76064 485 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 IL18RAPO95256 599 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 RBL1P28749 1068 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 PTGER1P34995 402 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 PIK3CBP42338 1070 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 GPC5P78333 572 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 CFHR3Q02985 330 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 SLC14A1Q13336 389 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 DAG1Q14118 895 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 MFSD13AQ14CX5 517 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 GRHL2Q6ISB3 625 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 RANBP10Q6VN20 620 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 C12orf76Q8N812 135 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 PRSS3P2Q8NHM4 247 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 ZBTB9Q96C00 473 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 USP29Q9HBJ7 922 aa5.52□□□□□ -1.53
UBE2D3-218ENST00000505009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 RHPN2P1A8MT19 583 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 FYB1O15117 783 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 PQBP1O60828 265 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 ADRA1DP25100 572 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 TRIP6Q15654 476 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 TMTC4Q5T4D3 741 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 VSTM1Q6UX27 236 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 LIX1LQ8IVB5 337 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 PNPLA1Q8N8W4 532 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 IQCDQ96DY2 449 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
UBE2D3-218ENST00000505009 KIF3BO15066 747 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms