RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	CCDC122	Q5T0U0	273 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	SH3PXD2A	Q5TCZ1	1133 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	PDZD3	Q86UT5	571 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	COLGALT2	Q8IYK4	626 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	PDCL2	Q8N4E4	241 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	SLC4A11	Q8NBS3	891 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	C3orf58	Q8NDZ4	430 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	WHAMM	Q8TF30	809 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	KBTBD7	Q8WVZ9	684 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	TRIM11	Q96F44	468 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	TMEM176A	Q96HP8	235 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	SENP8	Q96LD8	212 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	FAM193B	Q96PV7	902 aa	Predicted RBP	13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	MRPL45	Q9BRJ2	306 aa	Known RBP	13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	ELOVL4	Q9GZR5	314 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	SNX25	Q9H3E2	840 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	ACP6	Q9NPH0	428 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	CHST7	Q9NS84	486 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	MYO1A	Q9UBC5	1043 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	DSE	Q9UL01	958 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	PCDHGC3	Q9UN70	934 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	SSX2IP	Q9Y2D8	614 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	CEP83	Q9Y592	693 aa		13.61	□□□□□ -0.23
PEF1-208	ENST00000496805	BTNL10	A8MVZ5	291 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805		M0QZQ0	153 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	CYB561D2	O14569	222 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	HYAL3	O43820	417 aa	Predicted RBP	13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	KIF5C	O60282	957 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	ECI2	O75521	394 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	B3GAT3	O94766	335 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	KIF4A	O95239	1232 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	ALDH2	P05091	517 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	C8A	P07357	584 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	H2AFZ	P0C0S5	128 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	CHRNB1	P11230	501 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	VDR	P11473	427 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	FCAR	P24071	287 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	BRD2	P25440	801 aa	Known RBP	13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	CENPC	Q03188	943 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	SLC5A9	Q2M3M2	681 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	TANGO2	Q6ICL3	276 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	H2AFV	Q71UI9	128 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	ADAM32	Q8TC27	787 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	DNASE1L2	Q92874	299 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	TNIP3	Q96KP6	325 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	SUSD3	Q96L08	255 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	C16orf45	Q96MC5	204 aa	Predicted RBP	13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	TWNK	Q96RR1	684 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	IER2	Q9BTL4	223 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	EDEM2	Q9BV94	578 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	GPR62	Q9BZJ7	368 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	ISCU	Q9H1K1	167 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	PDCL3	Q9H2J4	239 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	CACNG4	Q9UBN1	327 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	KLK13	Q9UKR3	277 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	GPSM3	Q9Y4H4	160 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	PCNX2	A6NKB5	2137 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	TENM4	Q6N022	2769 aa		13.6	□□□□□ -0.23
PEF1-208	ENST00000496805	ACACA	Q13085	2346 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	MYO16	Q9Y6X6	1858 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805		A0A0A6YYK5	440 aa	Predicted RBP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805		O00370	1275 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	RTN2	O75298	545 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	CYP1A1	P04798	512 aa	Predicted RBP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	CYP11A1	P05108	521 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	TMEM253	P0C7T8	217 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	TYMP	P19971	482 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	CDH5	P33151	784 aa	Predicted RBP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	CNR2	P34972	360 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	MPL	P40238	635 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	NSF	P46459	744 aa	Known RBP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	LHX1	P48742	406 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	NOMO3	P69849	1222 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	COL28A1	Q2UY09	1125 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	ZNF394	Q53GI3	561 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	SGO2	Q562F6	1265 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	DSTYK	Q6XUX3	929 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	KBTBD6	Q86V97	674 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	OR6B3	Q8NGW1	331 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	ZNF606	Q8WXB4	792 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	FAM3C	Q92520	227 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	RABGGTA	Q92696	567 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	MCRS1	Q96EZ8	462 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	PCDHB18P	Q96TA0	734 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	PAAF1	Q9BRP4	392 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	ZNF518B	Q9C0D4	1074 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	LZTFL1	Q9NQ48	299 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	PCDHB8	Q9UN66	801 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	PIAS3	Q9Y6X2	628 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	APC2	O95996	2303 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	KIAA1549L	Q6ZVL6	1849 aa		13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PEF1-208	ENST00000496805	THADA	Q6YHU6	1953 aa		13.58	□□□□□ -0.24
PEF1-208	ENST00000496805	SHROOM3	Q8TF72	1996 aa		13.58	□□□□□ -0.24
PEF1-208	ENST00000496805	ANKRD62	A6NC57	917 aa		13.58	□□□□□ -0.24
PEF1-208	ENST00000496805	RCCD1	A6NED2	376 aa		13.58	□□□□□ -0.24
PEF1-208	ENST00000496805	C4orf47	A7E2U8	309 aa		13.58	□□□□□ -0.24

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