RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FAM86C2PA6NEL3 165 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 LRRC53A6NM62 1247 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 GPR37L1O60883 481 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 FMO1Q01740 532 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 ARID5AQ03989 594 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 TRIM68Q6AZZ1 485 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 CC2D1AQ6P1N0 951 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-208ENST00000494334 IRF2BP2Q7Z5L9 587 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 TADA2BQ86TJ2 420 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 TMEM35BQ8NCS4 154 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 NOX5Q96PH1 765 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 CDK5RAP1Q96SZ6 601 aaKnown RBP14.2□□□□□ -0.14
COL1A1-208ENST00000494334 NUP58Q9BVL2 599 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 C1QTNF1Q9BXJ1 281 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 RBSNQ9H1K0 784 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 HEBP1Q9NRV9 189 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 ABCC13Q9NSE7 274 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 DNMT3LQ9UJW3 386 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
COL1A1-208ENST00000494334 NUP210Q8TEM1 1887 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-208ENST00000494334 TECTAO75443 2155 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 PDGFBP01127 241 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-208ENST00000494334 CYP1A1P04798 512 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-208ENST00000494334 TPM3P06753 285 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 FERP16591 822 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 TNK2Q07912 1038 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 EFEMP1Q12805 493 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 PTPN20Q4JDL3 420 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 DDX42Q86XP3 938 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL1A1-208ENST00000494334 SIX5Q8N196 739 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 EDEM1Q92611 657 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 WBP2Q969T9 261 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 PCDHB18PQ96TA0 734 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 LINC00597Q9H2U6 94 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 HPS4Q9NQG7 708 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 ARHGEF3Q9NR81 526 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 GTSE1Q9NYZ3 720 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 CFAP97Q9P2B7 532 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 RASAL2Q9UJF2 1139 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 WNT6Q9Y6F9 365 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 BDP1A6H8Y1 2624 aa14.19□□□□□ -0.14
COL1A1-208ENST00000494334 A0A1W2PQJ5 194 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 FAM170AA1A519 330 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 SART1O43290 800 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 GREM1O60565 184 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 LSM8O95777 96 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 LTFP02788 710 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 ERBB2P04626 1255 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 FYNP06241 537 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 CCDC172P0C7W6 258 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 ARSAP15289 507 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 NOMO3P69849 1222 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 MLF2Q15773 248 aaPredicted RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 TMEM31Q5JXX7 168 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 RSRC2Q7L4I2 434 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 BMP8AQ7Z5Y6 402 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 KIAA1958Q8N8K9 716 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 TTC8Q8TAM2 541 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 CSGALNACT1Q8TDX6 532 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 RNF139Q8WU17 664 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 CPA5Q8WXQ8 436 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 GOLGA1Q92805 767 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 PIWIL1Q96J94 861 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 AGPAT1Q99943 283 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 OLA1Q9NTK5 396 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 DUS2Q9NX74 493 aaKnown RBP14.18□□□□□ -0.14
COL1A1-208ENST00000494334 AIPL1Q9NZN9 384 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 SH3BP1Q9Y3L3 701 aa14.18□□□□□ -0.14
COL1A1-208ENST00000494334 ITIH6Q6UXX5 1313 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 E2F8A0AVK6 867 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 OTOL1A6NHN0 477 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SHISA7A6NL88 538 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SCAMP3O14828 347 aaKnown RBP14.17□□□□□ -0.14
COL1A1-208ENST00000494334 AP5Z1O43299 807 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 IRF1P10914 325 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 UNGP13051 313 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-208ENST00000494334 GABRB2P47870 512 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 IFNAR2P48551 515 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SNX16P57768 344 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 STARD6P59095 220 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 COG7P83436 770 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 PRKCQQ04759 706 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 RUNX3Q13761 415 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 PDGFRLQ15198 375 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 TAF5Q15542 800 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 EML3Q32P44 896 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SFMBT2Q5VUG0 894 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 NAA35Q5VZE5 725 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
COL1A1-208ENST00000494334 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 FAM183BPQ6ZVS7 135 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms