RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 PM20D1Q6GTS8 502 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 KLHDC10Q6PID8 442 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 KIAA1958Q8N8K9 716 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 SLC35F5Q8WV83 523 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
COL5A1-206ENST00000465877 NELL2Q99435 816 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 ECT2Q9H8V3 914 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 CNGB3Q9NQW8 809 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 LIMA1Q9UHB6 759 aaKnown RBP13.55□□□□□ -0.24
COL5A1-206ENST00000465877 NUDT5Q9UKK9 219 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 SH3BP1Q9Y3L3 701 aa13.55□□□□□ -0.24
COL5A1-206ENST00000465877 CACNA1IQ9P0X4 2223 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 E2F8A0AVK6 867 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 PIK3R2O00459 728 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 NCAM2O15394 837 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 CYP17A1P05093 508 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 LCP1P13796 627 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 UCHL3P15374 230 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 GJA4P35212 333 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 DAOAP59103 153 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 PON2Q15165 354 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 FKBP15Q5T1M5 1219 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 PMF1Q6P1K2 205 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 APTXQ7Z2E3 356 aaKnown RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 SCML4Q8N228 414 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 ZNF276Q8N554 614 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 ZNF606Q8WXB4 792 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 WBP2Q969T9 261 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 CLDN23Q96B33 292 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 NAA15Q9BXJ9 866 aaKnown RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 GANQ9H2C0 597 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 RASAL2Q9UJF2 1139 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
COL5A1-206ENST00000465877 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
COL5A1-206ENST00000465877 ATG2BQ96BY7 2078 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 YJEFN3A6XGL0 299 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 E7ENQ6 273 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 F8VZ95 297 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 ATP1A3P13637 1013 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 GPD2P43304 727 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 KLK7P49862 253 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 EFEMP1Q12805 493 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 FZD5Q13467 585 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 CCINQ13939 588 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 LRRC32Q14392 662 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-206ENST00000465877 ANGPT1Q15389 498 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-206ENST00000465877 DENND1BQ6P3S1 775 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 RSRC2Q7L4I2 434 aaKnown RBP13.53□□□□□ -0.24
COL5A1-206ENST00000465877 SLC47A2Q86VL8 602 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 BBS7Q8IWZ6 715 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 CLEC4CQ8WTT0 213 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
COL5A1-206ENST00000465877 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
COL5A1-206ENST00000465877 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 SIK3Q9Y2K2 1263 aa13.53□□□□□ -0.24
COL5A1-206ENST00000465877 FOXN3O00409 490 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 GABBR2O75899 941 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 ADH1CP00326 375 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 CHRNB1P11230 501 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 CLCN1P35523 988 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 ZNF165P49910 485 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 AMPD2Q01433 879 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 NHLH1Q02575 133 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 PTK2Q05397 1052 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 NR1H3Q13133 447 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 PDCLQ13371 301 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 SYCP1Q15431 976 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 BTBD8Q5XKL5 378 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 PASD1Q8IV76 773 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 IRGQQ8WZA9 623 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 OTUB2Q96DC9 234 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 IER2Q9BTL4 223 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 LINC00597Q9H2U6 94 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 OLA1Q9NTK5 396 aaKnown RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 RBM12Q9NTZ6 932 aaKnown RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 SPATA6Q9NWH7 488 aaPredicted RBP13.52□□□□□ -0.25
COL5A1-206ENST00000465877 TBC1D14Q9P2M4 693 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 PCDHGC3Q9UN70 934 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 EML5Q05BV3 1969 aa13.52□□□□□ -0.25
COL5A1-206ENST00000465877 NYNRINQ9P2P1 1898 aaKnown RBP13.51□□□□□ -0.25
COL5A1-206ENST00000465877 SMTNL1A8MU46 457 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 E5RJQ4 531 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms