RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SFTPA1Q8IWL2 248 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 CCDC26Q8TAB7 109 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 LMO3Q8TAP4 145 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 USP33Q8TEY7 942 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 NT5C1BQ96P26 610 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 HHIPQ96QV1 700 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 PNKPQ96T60 521 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 DNMT3LQ9UJW3 386 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 NUDT5Q9UKK9 219 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 TSPAN16Q9UKR8 245 aa19.91■□□□□ 0.78
COL5A1-203ENST00000460264 RALGAPA1Q6GYQ0 2036 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 ANTXRLA6NF34 631 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 HOXC11O43248 304 aaPredicted RBP19.9■□□□□ 0.78
COL5A1-203ENST00000460264 GNA14O95837 355 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 CHRM1P11229 460 aaPredicted RBP19.9■□□□□ 0.78
COL5A1-203ENST00000460264 CD19P15391 556 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 BCAT1P54687 386 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 SEC13P55735 322 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 SLC8A3P57103 927 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 GAD2Q05329 585 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 GOLGA8FQ08AF8 430 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 GOLGA8DPQ0D2H9 430 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 DMC1Q14565 340 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 ETFBKMTQ8IXQ9 262 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 PHTF2Q8N3S3 785 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 ZNF276Q8N554 614 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 CAMKK1Q8N5S9 505 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 SPHK2Q9NRA0 654 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 CLIC5Q9NZA1 410 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 GMEB2Q9UKD1 530 aa19.9■□□□□ 0.78
COL5A1-203ENST00000460264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.89■□□□□ 0.77
COL5A1-203ENST00000460264 TULP2O00295 520 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 O00370 1275 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 XPO1O14980 1071 aaKnown RBP19.89■□□□□ 0.77
COL5A1-203ENST00000460264 KAT7O95251 611 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 VDRP11473 427 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 KDSRQ06136 332 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 PDE4CQ08493 712 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 CETN1Q12798 172 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 C2orf27AQ580R0 203 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 TMEM270Q6UE05 265 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 TADA2BQ86TJ2 420 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 TMEM25Q86YD3 366 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 PPM1KQ8N3J5 372 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 GAB3Q8WWW8 586 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 KAT5Q92993 513 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 DCHS1Q96JQ0 3298 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 SRRTQ9BXP5 876 aaKnown RBP19.89■□□□□ 0.77
COL5A1-203ENST00000460264 ARHGEF4Q9NR80 690 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 HESX1Q9UBX0 185 aa19.89■□□□□ 0.77
COL5A1-203ENST00000460264 LSM7Q9UK45 103 aaKnown RBP19.89■□□□□ 0.77
COL5A1-203ENST00000460264 APODP05090 189 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 PAEPP09466 180 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 RALAP11233 206 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 TKTL1P51854 596 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 BST2Q10589 180 aaKnown RBP19.88■□□□□ 0.77
COL5A1-203ENST00000460264 KCNH2Q12809 1159 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 ANO4Q32M45 955 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 CEP68Q76N32 757 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.88■□□□□ 0.77
COL5A1-203ENST00000460264 MIB1Q86YT6 1006 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 CDK5RAP1Q96SZ6 601 aaKnown RBP19.88■□□□□ 0.77
COL5A1-203ENST00000460264 RWDD2AQ9UIY3 292 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 KIAA1257Q9ULG3 409 aa19.88■□□□□ 0.77
COL5A1-203ENST00000460264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL5A1-203ENST00000460264 MYO18AQ92614 2054 aaKnown RBP19.88■□□□□ 0.77
COL5A1-203ENST00000460264 A0A0A0MRY4 1105 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 TULP3O75386 442 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 RPP40O75818 363 aaKnown RBP19.87■□□□□ 0.77
COL5A1-203ENST00000460264 STC2O76061 302 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 APBB3O95704 486 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 ZBED1O96006 694 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 AFPP02771 609 aaKnown RBP19.87■□□□□ 0.77
COL5A1-203ENST00000460264 TGM1P22735 817 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 GRIA2P42262 883 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 PLA2G4AP47712 749 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 MRPS21P82921 87 aaKnown RBP19.87■□□□□ 0.77
COL5A1-203ENST00000460264 BTBD8Q5XKL5 378 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 PM20D1Q6GTS8 502 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 Q6ZNB5 142 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 ARHGEF19Q8IW93 802 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 ARHGAP18Q8N392 663 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 GPR161Q8N6U8 529 aaKnown RBP19.87■□□□□ 0.77
COL5A1-203ENST00000460264 TFAP2BQ92481 460 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 ULBP1Q9BZM6 244 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 PARD6AQ9NPB6 346 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 MMP17Q9ULZ9 603 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 PCDHB4Q9Y5E5 795 aa19.87■□□□□ 0.77
COL5A1-203ENST00000460264 AXIN1O15169 862 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 FGFR1OPO95684 399 aaKnown RBP19.86■□□□□ 0.77
COL5A1-203ENST00000460264 RETP07949 1114 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 SETSIPP0DME0 302 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 CCDC192P0DO97 292 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 ID4P47928 161 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 YWHAGP61981 247 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL5A1-203ENST00000460264 GCNT1Q02742 428 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 ADIGQ0VDE8 80 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 PKDCCQ504Y2 493 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 LCLAT1Q6UWP7 414 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 RRAGAQ7L523 313 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms