RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 HGH1Q9BTY7 390 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 CNPPD1Q9BV87 410 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 GCOM2Q9BZD3 368 aaPredicted RBP8.16□□□□□ -1.1
BRCC3-208ENST00000453705 PAIP1Q9H074 479 aaKnown RBP8.16□□□□□ -1.1
BRCC3-208ENST00000453705 VPS16Q9H269 839 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 OBP2BQ9NPH6 170 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 IFNKQ9P0W0 207 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 NFE2L3Q9Y4A8 694 aa8.16□□□□□ -1.1
BRCC3-208ENST00000453705 SMCHD1A6NHR9 2005 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 TRIM43BA6NCK2 446 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 NT5C1B-RDH14C9J2C7 533 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 MAPK13O15264 365 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 PRODHO43272 600 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 DAPK3O43293 454 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 PAGE1O75459 146 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 LRG1P02750 347 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 PLCG1P19174 1290 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 NOS3P29474 1203 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 TUFMP49411 452 aaKnown RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 CCR5P51681 352 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 STAT2P52630 851 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 FCGRTP55899 365 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 RWDD2BP57060 319 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 PAK1Q13153 545 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 SNX1Q13596 522 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 MAP7Q14244 749 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 LETM2Q2VYF4 491 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 DGKKQ5KSL6 1271 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 NAIF1Q69YI7 327 aaPredicted RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 APOBEC3FQ8IUX4 373 aaKnown RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 SFRP1Q8N474 314 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 ANKS4BQ8N8V4 417 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 LRRC15Q8TF66 581 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 EXT2Q93063 718 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 TRIM43Q96BQ3 446 aaPredicted RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 CATSPER2Q96P56 530 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 CDK5RAP1Q96SZ6 601 aaKnown RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 TRPV6Q9H1D0 765 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 GORASP2Q9H8Y8 452 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 RNF181Q9P0P0 153 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 DDX25Q9UHL0 483 aaKnown RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 SLC39A10Q9ULF5 831 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 CLEC4AQ9UMR7 237 aa8.15□□□□□ -1.1
BRCC3-208ENST00000453705 MRPL11Q9Y3B7 192 aaKnown RBP8.15□□□□□ -1.1
BRCC3-208ENST00000453705 A0A0B4J269 797 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 POM121BA6NF01 834 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 PPEF2O14830 753 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 SLC37A4O43826 429 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 ALDH1A2O94788 518 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 CCNE1P24864 410 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 CLCN4P51793 760 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 OAZ1P54368 228 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 CARD18P57730 90 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 STIM1Q13586 685 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.11
BRCC3-208ENST00000453705 NFIL3Q16649 462 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 FIGNQ5HY92 759 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 ATAT1Q5SQI0 421 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 TEX35Q5T0J7 233 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 SNX30Q5VWJ9 437 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 KRT74Q7RTS7 529 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 NUDT13Q86X67 352 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 TMEM139Q8IV31 216 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 SLC22A9Q8IVM8 553 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 EFCAB13Q8IY85 973 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF321PQ8N8H1 164 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 BANPQ8N9N5 519 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 FAM71DQ8N9W8 422 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 CDC26Q8NHZ8 85 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 GRK7Q8WTQ7 553 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 NOX5Q96PH1 765 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 PYCARDQ9ULZ3 195 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 PCDHA1Q9Y5I3 950 aa8.15□□□□□ -1.11
BRCC3-208ENST00000453705 MYH11P35749 1972 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 F8W8V4 182 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 ATP2A1O14983 1001 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 KDM1AO60341 852 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 S100A6P06703 90 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 APEHP13798 732 aaKnown RBP8.14□□□□□ -1.11
BRCC3-208ENST00000453705 MAP4K2Q12851 820 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 GPS2Q13227 327 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 KARSQ15046 597 aaKnown RBP8.14□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF805Q5CZA5 627 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 EMC10Q5UCC4 262 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 TTI2Q6NXR4 508 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 ARMCX5Q6P1M9 558 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 DRICH1Q6PGQ1 229 aaPredicted RBP8.14□□□□□ -1.11
BRCC3-208ENST00000453705 NPNTQ6UXI9 565 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 SYT10Q6XYQ8 523 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 SEPT14Q6ZU15 432 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 SRGAP1Q7Z6B7 1085 aa8.14□□□□□ -1.11
BRCC3-208ENST00000453705 C17orf53Q8N3J3 647 aaPredicted RBP8.14□□□□□ -1.11
BRCC3-208ENST00000453705 GUF1Q8N442 669 aaKnown RBP8.14□□□□□ -1.11
BRCC3-208ENST00000453705 UHRF1Q96T88 793 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 456.7 ms