RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 MEI1Q5TIA1 1274 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 SYPL2Q5VXT5 272 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ITIH5Q86UX2 942 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.06■■□□□ 1.12
VPS13B-204ENST00000441350 CFAP57Q96MR6 1250 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 SLITRK1Q96PX8 696 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 ABCC13Q9NSE7 274 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 JRKLQ9Y4A0 524 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 HYOU1Q9Y4L1 999 aa22.06■■□□□ 1.12
VPS13B-204ENST00000441350 NRIP1P48552 1158 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 PSEN1P49768 467 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 KCNC3Q14003 757 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 PPM1LQ5SGD2 360 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 PEX26Q7Z412 305 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 ARFGAP1Q8N6T3 406 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 UBE2Q2Q8WVN8 375 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 OVCA2Q8WZ82 227 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 CENPIQ92674 756 aaPredicted RBP22.05■■□□□ 1.12
VPS13B-204ENST00000441350 NPY6RQ99463 290 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 OSER1Q9NX31 292 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 CLIC5Q9NZA1 410 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 DPP7Q9UHL4 492 aa22.05■■□□□ 1.12
VPS13B-204ENST00000441350 NCAM1P13591 858 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 HOXA9P31269 272 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 TAF12Q16514 161 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 C15orf59Q2T9L4 293 aaPredicted RBP22.04■■□□□ 1.12
VPS13B-204ENST00000441350 SLC25A52Q3SY17 297 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 BTBD8Q5XKL5 378 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 EDEM1Q92611 657 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 CD101Q93033 1021 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 CDCA3Q99618 268 aaPredicted RBP22.04■■□□□ 1.12
VPS13B-204ENST00000441350 TLR10Q9BXR5 811 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 ADAM33Q9BZ11 813 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 TTYH1Q9H313 450 aaPredicted RBP22.04■■□□□ 1.12
VPS13B-204ENST00000441350 TLR8Q9NR97 1041 aaKnown RBP22.04■■□□□ 1.12
VPS13B-204ENST00000441350 AMFRQ9UKV5 643 aa22.04■■□□□ 1.12
VPS13B-204ENST00000441350 CAPN9O14815 690 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 TFE3P19532 575 aaPredicted RBP22.03■■□□□ 1.12
VPS13B-204ENST00000441350 SH3PXD2AQ5TCZ1 1133 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 OTUD1Q5VV17 481 aaPredicted RBP22.03■■□□□ 1.12
VPS13B-204ENST00000441350 SNX30Q5VWJ9 437 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 DAB2IPQ5VWQ8 1189 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 BNIPLQ7Z465 357 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 PDZD8Q8NEN9 1154 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 RRN3Q9NYV6 651 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 STAP1Q9ULZ2 295 aa22.03■■□□□ 1.12
VPS13B-204ENST00000441350 SPOPO43791 374 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 RFPL2O75678 378 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 ENDOD1O94919 500 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 HNRNPA1P09651 372 aaKnown RBP eCLIP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 PITX1P78337 314 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 ATP11AP98196 1134 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 PRPF38BQ5VTL8 546 aaKnown RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 CC2D1AQ6P1N0 951 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 PPP2R3CQ969Q6 453 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 HES6Q96HZ4 224 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 ZNF512Q96ME7 567 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 TBCBQ99426 244 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 NAPGQ99747 312 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 LRRC3Q9BY71 257 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 NSUN3Q9H649 340 aaKnown RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 ZNF334Q9HCZ1 680 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 LMCD1Q9NZU5 365 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 UXTQ9UBK9 157 aaPredicted RBP22.02■■□□□ 1.12
VPS13B-204ENST00000441350 USTQ9Y2C2 406 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 CDH23Q9H251 3354 aa22.02■■□□□ 1.12
VPS13B-204ENST00000441350 CTAGE9A4FU28 777 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ENC1O14682 589 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 CCL16O15467 120 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 NCK2O43639 380 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 LRCH4O75427 683 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ATP1A1P05023 1023 aaKnown RBP22.02■■□□□ 1.11
VPS13B-204ENST00000441350 CASQ1P31415 396 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 RAB6CQ53S08 254 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 STRADAQ7RTN6 431 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ELMOD1Q8N336 334 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ZNF276Q8N554 614 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 VN1R2Q8NFZ6 395 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 FAM172AQ8WUF8 416 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 RAB6CQ9H0N0 254 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 IL21Q9HBE4 155 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ZDHHC7Q9NXF8 308 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 CALCOCO1Q9P1Z2 691 aa22.02■■□□□ 1.11
VPS13B-204ENST00000441350 PACSIN2Q9UNF0 486 aaPredicted RBP22.02■■□□□ 1.11
VPS13B-204ENST00000441350 ZNF840PA6NDX5 716 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 TADA3O75528 432 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 RNF8O76064 485 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 PAPLNO95428 1278 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 POU2F2P09086 479 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 GTF2F1P35269 517 aaKnown RBP eCLIP22.01■■□□□ 1.112e-7■■■■■ 26.9
VPS13B-204ENST00000441350 PCK1P35558 622 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 PPP3CCP48454 512 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 SULT1E1P49888 294 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 HDAC4P56524 1084 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 TAS2R40P59535 323 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 RBM10P98175 930 aaKnown RBP22.01■■□□□ 1.11
VPS13B-204ENST00000441350 CDO1Q16878 200 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 MSANTD2Q6P1R3 559 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 ELMSAN1Q6PJG2 1045 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms