RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
TTC3-208ENST00000428693 HNRNPABQ99729 332 aaKnown RBP12.69□□□□□ -0.38
TTC3-208ENST00000428693 TSG101Q99816 390 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 DUSP15Q9H1R2 295 aaPredicted RBP12.69□□□□□ -0.38
TTC3-208ENST00000428693 CYP3A43Q9HB55 503 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 SPHK2Q9NRA0 654 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 VPS45Q9NRW7 570 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 RXFP3Q9NSD7 469 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 EBF1Q9UH73 591 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
TTC3-208ENST00000428693 A0A1W2PQH9 124 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 TCRBV21S2A2A0A5A6 115 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 SGK1O00141 431 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 STX10O60499 249 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 CAVIN2O95810 425 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 HMBSP08397 361 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 ZDHHC11BP0C7U3 371 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 RARGP13631 454 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 WASP42768 502 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 MXI1P50539 228 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 PREPLQ4J6C6 727 aaPredicted RBP12.68□□□□□ -0.38
TTC3-208ENST00000428693 EOGTQ5NDL2 527 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 SNX30Q5VWJ9 437 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 IL17RCQ8NAC3 791 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
TTC3-208ENST00000428693 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
TTC3-208ENST00000428693 BBS2Q9BXC9 721 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 CSNK1G1Q9HCP0 422 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 DNAJC17Q9NVM6 304 aaKnown RBP12.68□□□□□ -0.38
TTC3-208ENST00000428693 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 PCDHGA5Q9Y5G8 931 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 THADAQ6YHU6 1953 aa12.68□□□□□ -0.38
TTC3-208ENST00000428693 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 MYO18AQ92614 2054 aaKnown RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 FAM237AA0A1B0GTK4 181 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 TRIM24O15164 1050 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 ZBTB24O43167 697 aaPredicted RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 TULP3O75386 442 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 BCKDHBP21953 392 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 TNFRSF4P43489 277 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 INCA1Q0VD86 236 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 BECN1Q14457 450 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 NFIL3Q16649 462 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 PPP1R26Q5T8A7 1209 aaPredicted RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 GRAMD4Q6IC98 578 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 CYP2U1Q7Z449 544 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 ZNF513Q8N8E2 541 aaPredicted RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 PIGKQ92643 395 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 SEMA4DQ92854 862 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 SPACA7Q96KW9 195 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 CNOT6LQ96LI5 555 aaKnown RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
TTC3-208ENST00000428693 NMUR1Q9HB89 426 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 OSER1Q9NX31 292 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 RASAL2Q9UJF2 1139 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 SCML2Q9UQR0 700 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
TTC3-208ENST00000428693 TPRP12270 2363 aaKnown RBP12.66□□□□□ -0.38
TTC3-208ENST00000428693 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 FAM92AA1XBS5 289 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 CILPO75339 1184 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 SMC2O95347 1197 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 RALAP11233 206 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 TYRP14679 529 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 HNRNPLP14866 589 aaKnown RBP eCLIP12.66□□□□□ -0.38
TTC3-208ENST00000428693 GTF2H1P32780 548 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 PRCPP42785 496 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 SLC8A3P57103 927 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 EFEMP1Q12805 493 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 LRMPQ12912 555 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 RSRC2Q7L4I2 434 aaKnown RBP12.66□□□□□ -0.38
TTC3-208ENST00000428693 LPCAT2Q7L5N7 544 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
TTC3-208ENST00000428693 TADA2BQ86TJ2 420 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 TMEFF1Q8IYR6 380 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 FBXL13Q8NEE6 735 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 DDX1Q92499 740 aaKnown RBP12.66□□□□□ -0.38
TTC3-208ENST00000428693 CNTNAP3BQ96NU0 1288 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 ARID3AQ99856 593 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 EDEM2Q9BV94 578 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 KLF16Q9BXK1 252 aaPredicted RBP12.66□□□□□ -0.38
TTC3-208ENST00000428693 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 CNTNAP3Q9BZ76 1288 aa12.66□□□□□ -0.38
TTC3-208ENST00000428693 CISHQ9NSE2 258 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms