RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NUDT5Q9UKK9 219 aa14.56□□□□□ -0.08
SCAF4-202ENST00000399804 CCDC195A0A1B0GUA6 201 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 TRUB2O95900 331 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 HADHBP55084 474 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 IFI35P80217 286 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 KCNA10Q16322 511 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 LRRC6Q86X45 466 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 NUDCD3Q8IVD9 361 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 SH3TC2Q8TF17 1288 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 GCNAQ96QF7 691 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 SNRNP25Q9BV90 132 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 XAB2Q9HCS7 855 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 PCDHGC3Q9UN70 934 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 hCG_1818297A0A087WSY0 165 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 IGKV6D-21A0A0A0MT36 114 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 CA12O43570 354 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 SPAG6O75602 509 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 CABYRO75952 493 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 ITGA7Q13683 1181 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 ZNF235Q14590 738 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 TAF1BQ53T94 588 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 ZC3H12AQ5D1E8 599 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 FAM171A1Q5VUB5 890 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 KCNT2Q6UVM3 1135 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 RASSF3Q86WH2 238 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 CHSY1Q86X52 802 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 FBXO32Q969P5 355 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 SGSM3Q96HU1 749 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 FRMD8Q9BZ67 464 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 R3HDMLQ9H3Y0 253 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 KIF9Q9HAQ2 790 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 DMAP1Q9NPF5 467 aaPredicted RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 PDLIM7Q9NR12 457 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 KANSL3Q9P2N6 904 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 PADI3Q9ULW8 664 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 COL24A1Q17RW2 1714 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 PRRG1O14668 218 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 RBL1P28749 1068 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 ASPAP45381 313 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 POLNQ7Z5Q5 900 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 DCLK2Q8N568 766 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 IPMKQ8NFU5 416 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 NINJ2Q9NZG7 142 aa14.55□□□□□ -0.08
SCAF4-202ENST00000399804 MRPL42Q9Y6G3 142 aaKnown RBP14.55□□□□□ -0.08
SCAF4-202ENST00000399804 KCNK1O00180 336 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 LRCH4O75427 683 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 MTA2O94776 668 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 LTFP02788 710 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 KRT4P19013 534 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 SSTR1P30872 391 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 BBS12Q6ZW61 710 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 XYLT1Q86Y38 959 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 CRLF3Q8IUI8 442 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 RIBC1Q8N443 379 aaPredicted RBP14.54□□□□□ -0.08
SCAF4-202ENST00000399804 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 TMEM169Q96HH4 297 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 POPDC2Q9HBU9 364 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 FGFR1OP2Q9NVK5 253 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 NAALADL1Q9UQQ1 740 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 STXBP5LQ9Y2K9 1186 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 MTSS1O43312 755 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 JCHAINP01591 159 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 BRCC3P46736 316 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 PRKCZQ05513 592 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 PCSK7Q16549 785 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 PMF1Q6P1K2 205 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 APOL2Q9BQE5 337 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 RNF208Q9H0X6 261 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 HMGXB4Q9UGU5 601 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.54□□□□□ -0.08
SCAF4-202ENST00000399804 SEPT4O43236 478 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 FAM107AO95990 144 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 SHBGP04278 402 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 KITP10721 976 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 TGM2P21980 687 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 NOS2P35228 1153 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 EFEMP1Q12805 493 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 TTMPQ5BVD1 217 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 MROH9Q5TGP6 573 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 MREGQ8N565 214 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 C16orf70Q9BSU1 422 aa14.54□□□□□ -0.08
SCAF4-202ENST00000399804 SNRPAP09012 282 aaKnown RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 PRAMEP78395 509 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ZNF280DQ6N043 979 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 TTC27Q6P3X3 843 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 TBC1D1Q86TI0 1168 aaPredicted RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ZNF669Q96BR6 464 aaPredicted RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 CELF6Q96J87 481 aaKnown RBP14.53□□□□□ -0.08
SCAF4-202ENST00000399804 SNX27Q96L92 541 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 RNF157Q96PX1 679 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 GPR88Q9GZN0 384 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 TRPC7Q9HCX4 862 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 FIS1Q9Y3D6 152 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 DNAJC25-GNG10A0A024R161 153 aa14.53□□□□□ -0.08
SCAF4-202ENST00000399804 ARHGAP42A6NI28 874 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms