RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 FGFR1P11362 822 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 PSEN2P49810 448 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 WDR4P57081 412 aaKnown RBP16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 CA9Q16790 459 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 PQLC3Q8N755 202 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 FAF2Q96CS3 445 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 SNX25Q9H3E2 840 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 FLRT1Q9NZU1 646 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 HEY1Q9Y5J3 304 aa16.28■□□□□ 0.2
TSC22D3-201ENST00000315660 SPTLC1O15269 473 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 CHADO15335 359 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 KCNN4O15554 427 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 TREHO43280 583 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 UBOX5O94941 541 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 PDGFRBP09619 1106 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 ZNF865P0CJ78 1059 aaPredicted RBP16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 CCDC130P13994 396 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 ADORA2BP29275 332 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 HDAC4P56524 1084 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 GPR162Q16538 588 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 TLDC1Q6P9B6 456 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 GBP7Q8N8V2 638 aaPredicted RBP16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 PCDH19Q8TAB3 1148 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 FBF1Q8TES7 1133 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 FRMD8Q9BZ67 464 aaPredicted RBP16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 ARL2BPQ9Y2Y0 163 aa16.27■□□□□ 0.2
TSC22D3-201ENST00000315660 ZNF487B1APH4 448 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 HAS3O00219 553 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 ASMTLO95671 621 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 ZBED1O96006 694 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 CA4P22748 312 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 SCNN1AP37088 669 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 MSH2P43246 934 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 PTPN9P43378 593 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 ACADSBP45954 432 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 CPT1AP50416 773 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 MTM1Q13496 603 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 EFTUD2Q15029 972 aaKnown RBP eCLIP16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 UBXN11Q5T124 520 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 SLC26A9Q7LBE3 791 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 C4orf33Q8N1A6 199 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 APPL2Q8NEU8 664 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 DENND1AQ8TEH3 1009 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 CYLDQ9NQC7 956 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 RAB6BQ9NRW1 208 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.19
TSC22D3-201ENST00000315660 SPAG6O75602 509 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 KCNE1P15382 129 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 TFE3P19532 575 aaPredicted RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 LMO2P25791 158 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 FOXN2P32314 431 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 TAF6P49848 677 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 CLNS1AP54105 237 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 NCALDP61601 193 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 KCNJ11Q14654 390 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 MTFR1Q15390 333 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 PPP6R3Q5H9R7 873 aaPredicted RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ADGRD1Q6QNK2 874 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ARCQ7LC44 396 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 RTP4Q96DX8 246 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 TNIP3Q96KP6 325 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 CYTH2Q99418 400 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 PAFAH2Q99487 392 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 PITPNM3Q9BZ71 974 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 SSU72Q9NP77 194 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 BCLAF3A2AJT9 711 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ZFXP17010 805 aaPredicted RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 KRT4P19013 534 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 TAC1P20366 129 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 RPL34P49207 117 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 SV2CQ496J9 727 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 MIEF2Q96C03 454 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 RSRC1Q96IZ7 334 aaKnown RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 DHRS4Q9BTZ2 278 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 ADAM33Q9BZ11 813 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 KLC2Q9H0B6 622 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 EBF2Q9HAK2 575 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 KLHL14Q9P2G3 628 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 CHMP2BQ9UQN3 213 aa16.26■□□□□ 0.19
TSC22D3-201ENST00000315660 IKBKGQ9Y6K9 419 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms