RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ADCK2Q7Z695 626 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 HES6Q96HZ4 224 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 WDCPQ9H6R7 721 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 TMA7Q9Y2S6 64 aaKnown RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 LINC00854A0A1B0GVQ3 168 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 HBP1O60381 514 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 LCA5LO95447 670 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 ASMTLO95671 621 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 GH1P01241 217 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 ACO1P21399 889 aaKnown RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 PCSK1P29120 753 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 RPL5P46777 297 aaKnown RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 MTTPP55157 894 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 MYL6P60660 151 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 SLC35C1Q96A29 364 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 CISHQ9NSE2 258 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 CYP2C8P10632 490 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 TTC30AQ86WT1 665 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 ARHGEF19Q8IW93 802 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 UNC45BQ8IWX7 931 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 MCOLN2Q8IZK6 566 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 TDRD5Q8NAT2 981 aaKnown RBP16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 RDM1Q8NG50 284 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 PPP1R2P1Q96PQ5 205 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 CCDC28BQ9BUN5 200 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 GPR63Q9BZJ6 419 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 PCDH9Q9HC56 1237 aa16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.3
SH3RF1-201ENST00000284637 C1orf232A0A0U1RR37 186 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 DPYSL4O14531 572 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 TADA2AO75478 443 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 SOX10P56693 466 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 LAMC2Q13753 1193 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CCDC142Q17RM4 750 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 HEATR4Q86WZ0 1026 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CHSY1Q86X52 802 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CLVS1Q8IUQ0 354 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 RNF148Q8N7C7 305 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 RMND5BQ96G75 393 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 PLEKHA8Q96JA3 519 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 BAZ2BQ9UIF8 2168 aaKnown RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 RGS5O15539 181 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 GARTP22102 1010 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CHRNB3Q05901 458 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 PPATQ06203 517 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 PWP1Q13610 501 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 SEPT5Q99719 369 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 PLGRKTQ9HBL7 147 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 E9PCH4 1651 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 MUTP22033 750 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CDC42EP1Q00587 391 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 ITGA9Q13797 1035 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CKAP2Q8WWK9 683 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 RXFP2Q8WXD0 754 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 SHOC2Q9UQ13 582 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 NR5A2O00482 541 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 ASNA1O43681 348 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 ENTPD5O75356 428 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 VDRP11473 427 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CYP2C9P11712 490 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 CHN2P52757 468 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 AMPD2Q01433 879 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 IQCKQ8N0W5 287 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 TNIP2Q8NFZ5 429 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 OXNAD1Q96HP4 312 aaPredicted RBP16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 PRKAG2Q9UGJ0 569 aa16.95■□□□□ 0.3
SH3RF1-201ENST00000284637 NEXMIFQ5QGS0 1516 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 SAC3D1A6NKF1 404 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ICAM1P05362 532 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 TAF6P49848 677 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 NCALDP61601 193 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 MMRN1Q13201 1228 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 AGKQ53H12 422 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 XRRA1Q6P2D8 792 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 FBXL16Q8N461 479 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 TMEM79Q9BSE2 394 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 CNPY3Q9BT09 278 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 GRIP2Q9C0E4 1043 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 DKK3Q9UBP4 350 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ACOT9Q9Y305 439 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 FGFR2P21802 821 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 NFYCQ13952 458 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 N4BP2L1Q5TBK1 243 aaPredicted RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 C11orf74Q86VG3 221 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 MIER2Q8N344 545 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 GLMNQ92990 594 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms