RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W RPS30AP0CX33 63 aaKnown RBP-0.81□□□□□ -2.54
YOP1YPR028W RPS30BP0CX34 63 aaKnown RBP-0.81□□□□□ -2.54
YOP1YPR028W Q0297Q9ZZV8 51 aa-0.81□□□□□ -2.54
YOP1YPR028W SNQ2P32568 1501 aaKnown RBP-0.81□□□□□ -2.54
YOP1YPR028W PDR5P33302 1511 aaKnown RBP-0.81□□□□□ -2.54
YOP1YPR028W ULS1Q08562 1619 aa-0.82□□□□□ -2.54
YOP1YPR028W TCB3Q03640 1545 aaKnown RBP-0.82□□□□□ -2.54
YOP1YPR028W RPL29P05747 59 aaPredicted RBP-0.82□□□□□ -2.54
YOP1YPR028W ARO1P08566 1588 aaKnown RBP-0.83□□□□□ -2.54
YOP1YPR028W DNF1P32660 1571 aa-0.83□□□□□ -2.54
YOP1YPR028W YFL041W-AQ3E817 63 aa-0.83□□□□□ -2.54
YOP1YPR028W CDC25P04821 1589 aa-0.83□□□□□ -2.54
YOP1YPR028W IQG1Q12280 1495 aa-0.84□□□□□ -2.54
YOP1YPR028W YLL066W-BQ8TGJ7 56 aa-0.84□□□□□ -2.54
YOP1YPR028W IML1P47170 1584 aa-0.85□□□□□ -2.55
YOP1YPR028W YIL046W-AQ3E7Z4 54 aa-0.85□□□□□ -2.55
YOP1YPR028W YCF1P39109 1515 aaKnown RBP-0.85□□□□□ -2.55
YOP1YPR028W YOR093CQ12275 1648 aa-0.86□□□□□ -2.55
YOP1YPR028W NUP159P40477 1460 aa-0.86□□□□□ -2.55
YOP1YPR028W YOL131WQ08270 108 aa-0.86□□□□□ -2.55
YOP1YPR028W PDR12Q02785 1511 aa-0.87□□□□□ -2.55
YOP1YPR028W YLR157W-DP0CE99 70 aa-0.87□□□□□ -2.55
YOP1YPR028W YSY6P38374 65 aa-0.87□□□□□ -2.55
YOP1YPR028W TOM7P53507 60 aa-0.88□□□□□ -2.55
YOP1YPR028W SPT6P23615 1451 aaKnown RBP-0.88□□□□□ -2.55
YOP1YPR028W NUP192P47054 1683 aa-0.88□□□□□ -2.55
YOP1YPR028W STU1P38198 1513 aa-0.89□□□□□ -2.55
YOP1YPR028W DOP1Q03921 1698 aa-0.9□□□□□ -2.55
YOP1YPR028W PDR15Q04182 1529 aaKnown RBP-0.9□□□□□ -2.55
YOP1YPR028W RRP5Q05022 1729 aaKnown RBP-0.91□□□□□ -2.55
YOP1YPR028W PAI3P01094 68 aa-0.91□□□□□ -2.56
YOP1YPR028W YOR316C-AQ3E806 69 aa-0.91□□□□□ -2.56
YOP1YPR028W GCN2P15442 1659 aa-0.91□□□□□ -2.56
YOP1YPR028W YJL133C-AQ3E7A3 74 aa-0.92□□□□□ -2.56
YOP1YPR028W YOL166W-AQ8TGJ1 51 aa-0.92□□□□□ -2.56
YOP1YPR028W NUP188P52593 1655 aaKnown RBP-0.92□□□□□ -2.56
YOP1YPR028W YBT1P32386 1661 aa-0.94□□□□□ -2.56
YOP1YPR028W YPR010C-AA5Z2X5 72 aa-0.94□□□□□ -2.56
YOP1YPR028W HOR7Q05827 59 aa-0.94□□□□□ -2.56
YOP1YPR028W PMP3P87284 55 aa-0.95□□□□□ -2.56
YOP1YPR028W CHC1P22137 1653 aaKnown RBP-0.96□□□□□ -2.56
YOP1YPR028W DDR2P89113 61 aa-0.96□□□□□ -2.56
YOP1YPR028W YIL102C-AQ2V2P5 75 aa-0.96□□□□□ -2.56
YOP1YPR028W SCC2Q04002 1493 aa-0.97□□□□□ -2.56
YOP1YPR028W PEP1P32319 1579 aa-0.97□□□□□ -2.56
YOP1YPR028W VMR1P38735 1592 aa-0.97□□□□□ -2.56
YOP1YPR028W BUD3P25558 1636 aa-0.97□□□□□ -2.57
YOP1YPR028W YFR010W-AP0C5N0 62 aa-0.99□□□□□ -2.57
YOP1YPR028W HIR3P47171 1648 aa-1□□□□□ -2.57
YOP1YPR028W MON2P48563 1636 aaPredicted RBP-1□□□□□ -2.57
YOP1YPR028W RPL39P04650 51 aa-1.02□□□□□ -2.57
YOP1YPR028W MYO4P32492 1471 aa-1.02□□□□□ -2.57
YOP1YPR028W NUP170P38181 1502 aa-1.03□□□□□ -2.57
YOP1YPR028W YJL127C-BQ3E828 52 aa-1.03□□□□□ -2.57
YOP1YPR028W COX9P07255 59 aa-1.04□□□□□ -2.58
YOP1YPR028W YKL023C-AQ2V2P3 75 aa-1.05□□□□□ -2.58
YOP1YPR028W ATG2P53855 1592 aa-1.07□□□□□ -2.58
YOP1YPR028W MLP2P40457 1679 aa-1.1□□□□□ -2.58
YOP1YPR028W YLR342W-AQ3E810 57 aa-1.1□□□□□ -2.59
YOP1YPR028W SMX2P40204 77 aaKnown RBP-1.12□□□□□ -2.59
YOP1YPR028W NCE101Q02820 53 aa-1.13□□□□□ -2.59
YOP1YPR028W USO1P25386 1790 aa-1.18□□□□□ -2.6
YOP1YPR028W VMA9Q3E7B6 73 aa-1.18□□□□□ -2.6
Retrieved 63 of 5,963 RNA–protein pairs in 4.9 ms