RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W NCE101Q02820 53 aa2.14□□□□□ -2.07
ROT1YMR200W YBR200W-AQ3E755 54 aa2.14□□□□□ -2.07
ROT1YMR200W CUP1-1P0CX80 61 aa2.13□□□□□ -2.07
ROT1YMR200W CUP1-2P0CX81 61 aa2.13□□□□□ -2.07
ROT1YMR200W YIL046W-AQ3E7Z4 54 aa2.13□□□□□ -2.07
ROT1YMR200W NUM1Q00402 2748 aa2.12□□□□□ -2.07
ROT1YMR200W YLR157W-EP0CF00 54 aa2.12□□□□□ -2.07
ROT1YMR200W YOR011W-AQ3E807 68 aa2.12□□□□□ -2.07
ROT1YMR200W YOR192C-CQ3E736 78 aa2.11□□□□□ -2.07
ROT1YMR200W YLR307C-AQ3E825 87 aa2.11□□□□□ -2.07
ROT1YMR200W RPS27AP35997 82 aaKnown RBP2.1□□□□□ -2.07
ROT1YMR200W RPS27BP38711 82 aa2.1□□□□□ -2.07
ROT1YMR200W YMR001C-AQ8TGS9 76 aa2.09□□□□□ -2.07
ROT1YMR200W PRP8P33334 2413 aaKnown RBP2.08□□□□□ -2.08
ROT1YMR200W IRA1P18963 3092 aa2.06□□□□□ -2.08
ROT1YMR200W YBR056W-AI2HB52 66 aa2.06□□□□□ -2.08
ROT1YMR200W YOR394C-AQ8TGJ0 55 aa2.06□□□□□ -2.08
ROT1YMR200W GCN1P33892 2672 aaKnown RBP2.06□□□□□ -2.08
ROT1YMR200W CSF1Q12150 2958 aa2.06□□□□□ -2.08
ROT1YMR200W MEC1P38111 2368 aa2.06□□□□□ -2.08
ROT1YMR200W YLR157W-DP0CE99 70 aa2.05□□□□□ -2.08
ROT1YMR200W YOL164W-AQ3E7A5 60 aa2.05□□□□□ -2.08
ROT1YMR200W COA2Q3E823 68 aa2.05□□□□□ -2.08
ROT1YMR200W YGL258W-AQ3E740 77 aa2.02□□□□□ -2.09
ROT1YMR200W TRA1P38811 3744 aa2.01□□□□□ -2.09
ROT1YMR200W SIP18P50263 79 aa2□□□□□ -2.09
ROT1YMR200W RPL37BP51402 88 aaKnown RBP2□□□□□ -2.09
ROT1YMR200W OLI1P61829 76 aa2□□□□□ -2.09
ROT1YMR200W YBR016WP38216 128 aa1.97□□□□□ -2.09
ROT1YMR200W TOM7P53507 60 aa1.96□□□□□ -2.1
ROT1YMR200W RPL39P04650 51 aa1.94□□□□□ -2.1
ROT1YMR200W YGR025WP53216 100 aa1.94□□□□□ -2.1
ROT1YMR200W YMR105W-AQ8TGS8 64 aa1.94□□□□□ -2.1
ROT1YMR200W YFR009W-AP0C5M9 85 aa1.93□□□□□ -2.1
ROT1YMR200W YLR342W-AQ3E810 57 aa1.92□□□□□ -2.1
ROT1YMR200W UTP20P35194 2493 aaKnown RBP1.9□□□□□ -2.11
ROT1YMR200W YBR230W-AQ3E762 66 aa1.89□□□□□ -2.11
ROT1YMR200W YBL044WP38194 122 aa1.88□□□□□ -2.11
ROT1YMR200W TOS6P48560 102 aa1.88□□□□□ -2.11
ROT1YMR200W YOR008C-AQ3E7B9 74 aa1.88□□□□□ -2.11
ROT1YMR200W Q0297Q9ZZV8 51 aa1.87□□□□□ -2.11
ROT1YMR200W HOR7Q05827 59 aa1.84□□□□□ -2.11
ROT1YMR200W PMP3P87284 55 aa1.83□□□□□ -2.12
ROT1YMR200W YPR010C-AA5Z2X5 72 aa1.81□□□□□ -2.12
ROT1YMR200W DYN1P36022 4092 aa1.8□□□□□ -2.12
ROT1YMR200W MDN1Q12019 4910 aaKnown RBP1.77□□□□□ -2.13
ROT1YMR200W YLL006W-AQ3E814 58 aa1.76□□□□□ -2.13
ROT1YMR200W RPS29BP41058 56 aaKnown RBP1.75□□□□□ -2.13
ROT1YMR200W RPL29P05747 59 aaPredicted RBP1.73□□□□□ -2.13
ROT1YMR200W YCR108CQ3E819 63 aa1.72□□□□□ -2.13
ROT1YMR200W YGR146C-AQ8TGT9 53 aa1.7□□□□□ -2.14
ROT1YMR200W YJL127C-BQ3E828 52 aa1.69□□□□□ -2.14
ROT1YMR200W DDR2P89113 61 aa1.65□□□□□ -2.15
ROT1YMR200W YJL133C-AQ3E7A3 74 aa1.65□□□□□ -2.15
ROT1YMR200W YLL066W-BQ8TGJ7 56 aa1.65□□□□□ -2.15
ROT1YMR200W YDR034C-AP0C289 58 aa1.61□□□□□ -2.15
ROT1YMR200W YHR073W-AP0C5N7 58 aa1.52□□□□□ -2.17
ROT1YMR200W YOR316C-AQ3E806 69 aa1.49□□□□□ -2.17
ROT1YMR200W YOR072W-BQ3E832 53 aa1.4□□□□□ -2.19
ROT1YMR200W Q0017Q9ZZX8 53 aa1.35□□□□□ -2.19
ROT1YMR200W YML054C-AQ3E809 52 aa1.34□□□□□ -2.19
ROT1YMR200W RPS29AP41057 56 aaKnown RBP1.32□□□□□ -2.2
ROT1YMR200W YHR050W-AQ05451 56 aa1.06□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 46 ms