RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W PAU18P0CE91 120 aa-0.64□□□□□ -2.51
PRP39YML046W PBI2P0CT04 75 aaKnown RBP-0.64□□□□□ -2.51
PRP39YML046W POP7P38291 140 aa-0.64□□□□□ -2.51
PRP39YML046W HUR1P45820 110 aa-0.64□□□□□ -2.51
PRP39YML046W SNN1P48232 102 aa-0.64□□□□□ -2.51
PRP39YML046W PAU20Q08322 120 aa-0.64□□□□□ -2.51
PRP39YML046W YDR182W-AQ3E796 67 aa-0.64□□□□□ -2.51
PRP39YML046W YOR008C-AQ3E7B9 74 aa-0.64□□□□□ -2.51
PRP39YML046W ELC1Q03071 99 aa-0.65□□□□□ -2.51
PRP39YML046W ATP17Q06405 101 aa-0.65□□□□□ -2.51
PRP39YML046W CMC2Q3E7A4 109 aa-0.65□□□□□ -2.51
PRP39YML046W YNR034W-AQ3E841 98 aa-0.65□□□□□ -2.51
PRP39YML046W YOR304C-AO14468 76 aa-0.65□□□□□ -2.51
PRP39YML046W PAU4P53427 120 aa-0.65□□□□□ -2.51
PRP39YML046W YMR090WQ04304 227 aaKnown RBP-0.65□□□□□ -2.51
PRP39YML046W YOR105WQ08504 108 aa-0.65□□□□□ -2.51
PRP39YML046W YGL194C-AQ2V2P6 80 aa-0.65□□□□□ -2.51
PRP39YML046W SDH6Q3E785 79 aa-0.65□□□□□ -2.51
PRP39YML046W YOR376W-AQ3E805 51 aa-0.65□□□□□ -2.51
PRP39YML046W YGR146C-AQ8TGT9 53 aa-0.65□□□□□ -2.51
PRP39YML046W YBR201C-AQ2V2Q3 67 aa-0.66□□□□□ -2.52
PRP39YML046W TOM6P33448 61 aa-0.67□□□□□ -2.52
PRP39YML046W PAU13P38725 120 aa-0.67□□□□□ -2.52
PRP39YML046W YCR095W-AQ3E787 52 aa-0.67□□□□□ -2.52
PRP39YML046W CGR1P53188 120 aa-0.67□□□□□ -2.52
PRP39YML046W YGR039WP53225 103 aa-0.67□□□□□ -2.52
PRP39YML046W QCR9P22289 66 aa-0.68□□□□□ -2.52
PRP39YML046W APS2Q00381 147 aa-0.68□□□□□ -2.52
PRP39YML046W SPC24Q04477 213 aa-0.68□□□□□ -2.52
PRP39YML046W YKL065W-AQ2V2P2 73 aa-0.68□□□□□ -2.52
PRP39YML046W SRB6P32570 121 aa-0.69□□□□□ -2.52
PRP39YML046W RPB11P38902 120 aa-0.69□□□□□ -2.52
PRP39YML046W ATP18P81450 59 aa-0.69□□□□□ -2.52
PRP39YML046W YHR213W-AQ8TGT4 77 aa-0.69□□□□□ -2.52
PRP39YML046W YCR085WP25650 117 aa-0.69□□□□□ -2.52
PRP39YML046W YBR032WP38223 100 aa-0.69□□□□□ -2.52
PRP39YML046W YLR099W-AQ3E798 87 aa-0.69□□□□□ -2.52
PRP39YML046W PAU7P39545 55 aa-0.7□□□□□ -2.52
PRP39YML046W SAE3P89114 91 aa-0.7□□□□□ -2.52
PRP39YML046W YNL277W-AQ3E7Z0 62 aa-0.7□□□□□ -2.52
PRP39YML046W RBL2P48606 106 aaKnown RBP-0.71□□□□□ -2.52
PRP39YML046W GIM5Q04493 163 aa-0.71□□□□□ -2.52
PRP39YML046W MSL1P40567 111 aaPredicted RBP-0.71□□□□□ -2.52
PRP39YML046W VMA21P41806 77 aa-0.72□□□□□ -2.52
PRP39YML046W YDL022C-AP0C5L6 82 aa-0.73□□□□□ -2.53
PRP39YML046W YMR103CQ04436 120 aa-0.74□□□□□ -2.53
PRP39YML046W YCL001W-BQ96VH2 84 aa-0.75□□□□□ -2.53
PRP39YML046W WIP1Q2V2P8 89 aa-0.77□□□□□ -2.53
PRP39YML046W NOP10Q6Q547 58 aaPredicted RBP-0.77□□□□□ -2.53
PRP39YML046W HMRA1P0CY11 126 aa-0.78□□□□□ -2.53
PRP39YML046W YLR146W-AQ2V2P1 62 aa-0.78□□□□□ -2.53
PRP39YML046W YPL225WQ08971 146 aaKnown RBP-0.79□□□□□ -2.54
PRP39YML046W YOR314WQ12506 109 aa-0.83□□□□□ -2.54
PRP39YML046W SUS1Q6WNK7 96 aa-0.84□□□□□ -2.54
PRP39YML046W HUB1Q6Q546 73 aa-0.86□□□□□ -2.55
PRP39YML046W SSS1P35179 80 aa-0.88□□□□□ -2.55
PRP39YML046W YFL041W-AQ3E817 63 aa-0.9□□□□□ -2.55
PRP39YML046W YOL166W-AQ8TGJ1 51 aa-0.97□□□□□ -2.56
PRP39YML046W ZEO1Q08245 113 aa-0.99□□□□□ -2.57
PRP39YML046W PAI3P01094 68 aa-1□□□□□ -2.57
PRP39YML046W YSY6P38374 65 aa-1.01□□□□□ -2.57
PRP39YML046W YIL102C-AQ2V2P5 75 aa-1.05□□□□□ -2.58
PRP39YML046W VMA9Q3E7B6 73 aa-1.07□□□□□ -2.58
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms