RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YDR010CQ12426 110 aa3.86□□□□□ -1.79
SSK1YLR006C YLR307C-AQ3E825 87 aa3.86□□□□□ -1.79
SSK1YLR006C YJL133C-AQ3E7A3 74 aa3.85□□□□□ -1.79
SSK1YLR006C MRX7P53869 86 aa3.84□□□□□ -1.79
SSK1YLR006C YKL065W-AQ2V2P2 73 aa3.83□□□□□ -1.8
SSK1YLR006C NOP10Q6Q547 58 aaPredicted RBP3.83□□□□□ -1.8
SSK1YLR006C BSC4P53841 131 aa3.82□□□□□ -1.8
SSK1YLR006C YHR007C-AQ07074 71 aa3.82□□□□□ -1.8
SSK1YLR006C YGL041C-BQ3E750 60 aa3.82□□□□□ -1.8
SSK1YLR006C YIL102CP40488 101 aa3.82□□□□□ -1.8
SSK1YLR006C YGL014C-AP0C5N1 53 aa3.81□□□□□ -1.8
SSK1YLR006C DDR2P89113 61 aa3.81□□□□□ -1.8
SSK1YLR006C YOR072WQ08486 104 aa3.8□□□□□ -1.8
SSK1YLR006C AUA1P32450 94 aa3.78□□□□□ -1.8
SSK1YLR006C GIS2P53849 153 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
SSK1YLR006C YMR230W-AQ3E7B5 62 aa3.75□□□□□ -1.81
SSK1YLR006C YOL166W-AQ8TGJ1 51 aa3.75□□□□□ -1.81
SSK1YLR006C YDR182W-AQ3E796 67 aa3.74□□□□□ -1.81
SSK1YLR006C LCL2Q08045 131 aa3.73□□□□□ -1.81
SSK1YLR006C YDR034C-AP0C289 58 aa3.73□□□□□ -1.81
SSK1YLR006C RPS30AP0CX33 63 aaKnown RBP3.73□□□□□ -1.81
SSK1YLR006C RPS30BP0CX34 63 aaKnown RBP3.73□□□□□ -1.81
SSK1YLR006C YDR210WQ03482 75 aa3.73□□□□□ -1.81
SSK1YLR006C YJL144WP47009 104 aa3.72□□□□□ -1.81
SSK1YLR006C YAR064WP39563 99 aa3.7□□□□□ -1.82
SSK1YLR006C DYN1P36022 4092 aa3.69□□□□□ -1.82
SSK1YLR006C YOL013W-AP0C272 63 aaPredicted RBP3.68□□□□□ -1.82
SSK1YLR006C YLR255CO13574 117 aa3.65□□□□□ -1.83
SSK1YLR006C YLR157W-DP0CE99 70 aa3.64□□□□□ -1.83
SSK1YLR006C SDH6Q3E785 79 aa3.61□□□□□ -1.83
SSK1YLR006C YDL012CQ12489 107 aa3.6□□□□□ -1.83
SSK1YLR006C YOL097W-AQ3E7Y9 61 aa3.59□□□□□ -1.83
SSK1YLR006C YMR001C-AQ8TGS9 76 aa3.56□□□□□ -1.84
SSK1YLR006C HUB1Q6Q546 73 aa3.56□□□□□ -1.84
SSK1YLR006C LCL1Q02786 101 aa3.55□□□□□ -1.84
SSK1YLR006C YBR201C-AQ2V2Q3 67 aa3.54□□□□□ -1.84
SSK1YLR006C ATP17Q06405 101 aa3.53□□□□□ -1.84
SSK1YLR006C YJR128WP47162 119 aa3.52□□□□□ -1.85
SSK1YLR006C YNL122CP53921 115 aaPredicted RBP3.52□□□□□ -1.85
SSK1YLR006C YHR073W-AP0C5N7 58 aa3.47□□□□□ -1.85
SSK1YLR006C YOR316C-AQ3E806 69 aa3.47□□□□□ -1.85
SSK1YLR006C YGR146C-AQ8TGT9 53 aa3.46□□□□□ -1.86
SSK1YLR006C OLI1P61829 76 aa3.39□□□□□ -1.87
SSK1YLR006C COX7P10174 60 aa3.37□□□□□ -1.87
SSK1YLR006C YBR016WP38216 128 aa3.34□□□□□ -1.88
SSK1YLR006C RPL37BP51402 88 aaKnown RBP3.28□□□□□ -1.88
SSK1YLR006C YJL009WP47078 108 aa3.25□□□□□ -1.89
SSK1YLR006C YHR086W-AQ3E746 53 aa3.24□□□□□ -1.89
SSK1YLR006C YBL044WP38194 122 aa3.19□□□□□ -1.9
SSK1YLR006C YCR108CQ3E819 63 aa3.16□□□□□ -1.9
SSK1YLR006C MDN1Q12019 4910 aaKnown RBP3.16□□□□□ -1.9
SSK1YLR006C YOR394C-AQ8TGJ0 55 aa3.14□□□□□ -1.91
SSK1YLR006C HHY1P39982 102 aa3.04□□□□□ -1.92
SSK1YLR006C Q0017Q9ZZX8 53 aa3□□□□□ -1.93
SSK1YLR006C RPL37AP49166 88 aaKnown RBP2.98□□□□□ -1.93
SSK1YLR006C YML054C-AQ3E809 52 aa2.96□□□□□ -1.93
SSK1YLR006C YBR072C-AQ3E794 53 aa2.95□□□□□ -1.94
SSK1YLR006C YOR072W-BQ3E832 53 aa2.92□□□□□ -1.94
SSK1YLR006C YOL164W-AQ3E7A5 60 aa2.75□□□□□ -1.97
SSK1YLR006C YLR157W-EP0CF00 54 aa2.63□□□□□ -1.99
SSK1YLR006C YHR050W-AQ05451 56 aa2.34□□□□□ -2.03
SSK1YLR006C RPS29BP41058 56 aaKnown RBP2.29□□□□□ -2.04
SSK1YLR006C RPS29AP41057 56 aaKnown RBP2.15□□□□□ -2.07
Retrieved 63 of 5,963 RNA–protein pairs in 99.5 ms