RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W YOR034C-AQ3E735 80 aa0.21□□□□□ -2.38
PRP16YKR086W SHU1P38751 150 aa0.2□□□□□ -2.38
PRP16YKR086W MRPS12P53732 153 aa0.2□□□□□ -2.38
PRP16YKR086W ICY1Q04329 127 aa0.2□□□□□ -2.38
PRP16YKR086W YLR146W-AQ2V2P1 62 aa0.2□□□□□ -2.38
PRP16YKR086W RRT15Q3E811 62 aa0.2□□□□□ -2.38
PRP16YKR086W DDR2P89113 61 aa0.2□□□□□ -2.38
PRP16YKR086W PAU17Q12370 124 aa0.19□□□□□ -2.38
PRP16YKR086W YBR230W-AQ3E762 66 aa0.19□□□□□ -2.38
PRP16YKR086W YJL127C-BQ3E828 52 aa0.19□□□□□ -2.38
PRP16YKR086W BSC4P53841 131 aa0.19□□□□□ -2.38
PRP16YKR086W YPL038W-AQ3E7B4 63 aa0.19□□□□□ -2.38
PRP16YKR086W YDL022C-AP0C5L6 82 aa0.18□□□□□ -2.38
PRP16YKR086W PAU23Q07987 124 aa0.18□□□□□ -2.38
PRP16YKR086W YLL006W-AQ3E814 58 aa0.18□□□□□ -2.38
PRP16YKR086W YCL001W-BQ96VH2 84 aa0.18□□□□□ -2.38
PRP16YKR086W MSL1P40567 111 aaPredicted RBP0.17□□□□□ -2.38
PRP16YKR086W RPL38P49167 78 aaKnown RBP0.17□□□□□ -2.38
PRP16YKR086W ATP17Q06405 101 aa0.17□□□□□ -2.38
PRP16YKR086W HPA2Q06592 156 aa0.17□□□□□ -2.38
PRP16YKR086W YNR034W-AQ3E841 98 aa0.17□□□□□ -2.38
PRP16YKR086W SRB6P32570 121 aa0.17□□□□□ -2.38
PRP16YKR086W ZEO1Q08245 113 aa0.17□□□□□ -2.38
PRP16YKR086W RUB1Q03919 77 aa0.17□□□□□ -2.38
PRP16YKR086W YJL133C-AQ3E7A3 74 aa0.17□□□□□ -2.38
PRP16YKR086W VMA9Q3E7B6 73 aa0.16□□□□□ -2.38
PRP16YKR086W YOR316C-AQ3E806 69 aa0.16□□□□□ -2.38
PRP16YKR086W MIC10Q96VH5 97 aa0.16□□□□□ -2.38
PRP16YKR086W YCR085WP25650 117 aa0.16□□□□□ -2.38
PRP16YKR086W TDA2P40045 126 aa0.15□□□□□ -2.38
PRP16YKR086W YLR157W-EP0CF00 54 aa0.15□□□□□ -2.39
PRP16YKR086W ATP18P81450 59 aa0.15□□□□□ -2.39
PRP16YKR086W YBL044WP38194 122 aa0.15□□□□□ -2.39
PRP16YKR086W YFL041W-AQ3E817 63 aa0.15□□□□□ -2.39
PRP16YKR086W YGR146C-AQ8TGT9 53 aa0.15□□□□□ -2.39
PRP16YKR086W YDR119W-AQ2V2P9 66 aa0.14□□□□□ -2.39
PRP16YKR086W YDR381C-AQ3E6R5 114 aa0.14□□□□□ -2.39
PRP16YKR086W YDR246W-AQ3E763 66 aa0.14□□□□□ -2.39
PRP16YKR086W YFR009W-AP0C5M9 85 aa0.14□□□□□ -2.39
PRP16YKR086W YJR107C-AP0CT86 78 aa0.14□□□□□ -2.39
PRP16YKR086W LSM6Q06406 86 aaKnown RBP0.14□□□□□ -2.39
PRP16YKR086W OLI1P61829 76 aa0.13□□□□□ -2.39
PRP16YKR086W YOL164W-AQ3E7A5 60 aa0.13□□□□□ -2.39
PRP16YKR086W YHR050W-AQ05451 56 aa0.13□□□□□ -2.39
PRP16YKR086W YIL156W-BQ2V2P4 73 aa0.13□□□□□ -2.39
PRP16YKR086W PAI3P01094 68 aa0.12□□□□□ -2.39
PRP16YKR086W YNL198CP40166 100 aa0.12□□□□□ -2.39
PRP16YKR086W YOR072W-BQ3E832 53 aa0.12□□□□□ -2.39
PRP16YKR086W HUB1Q6Q546 73 aa0.12□□□□□ -2.39
PRP16YKR086W YCR095W-AQ3E787 52 aa0.11□□□□□ -2.39
PRP16YKR086W YOR394C-AQ8TGJ0 55 aa0.11□□□□□ -2.39
PRP16YKR086W YSY6P38374 65 aa0.11□□□□□ -2.39
PRP16YKR086W YIL102C-AQ2V2P5 75 aa0.11□□□□□ -2.39
PRP16YKR086W YBR201C-AQ2V2Q3 67 aa0.1□□□□□ -2.39
PRP16YKR086W RPS30AP0CX33 63 aaKnown RBP0.09□□□□□ -2.39
PRP16YKR086W RPS30BP0CX34 63 aaKnown RBP0.09□□□□□ -2.39
PRP16YKR086W SDH6Q3E785 79 aa0.09□□□□□ -2.39
PRP16YKR086W SSS1P35179 80 aa0.09□□□□□ -2.4
PRP16YKR086W YOL166W-AQ8TGJ1 51 aa0.08□□□□□ -2.4
PRP16YKR086W YIL134C-AQ45U18 67 aa0.08□□□□□ -2.4
PRP16YKR086W YMR001C-AQ8TGS9 76 aa0.07□□□□□ -2.4
PRP16YKR086W NOP10Q6Q547 58 aaPredicted RBP0.06□□□□□ -2.4
PRP16YKR086W YCR108CQ3E819 63 aa0.04□□□□□ -2.4
Retrieved 63 of 5,963 RNA–protein pairs in 7.5 ms