RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C PAU23Q07987 124 aa0.79□□□□□ -2.28
SHE2YKL130C YKL023C-AQ2V2P3 75 aa0.79□□□□□ -2.28
SHE2YKL130C VMA9Q3E7B6 73 aa0.79□□□□□ -2.28
SHE2YKL130C YJL127C-BQ3E828 52 aa0.79□□□□□ -2.28
SHE2YKL130C MSL1P40567 111 aaPredicted RBP0.78□□□□□ -2.28
SHE2YKL130C YBR072C-AQ3E794 53 aa0.78□□□□□ -2.28
SHE2YKL130C YLL006W-AQ3E814 58 aa0.78□□□□□ -2.28
SHE2YKL130C Q0017Q9ZZX8 53 aa0.78□□□□□ -2.28
SHE2YKL130C DYN1P36022 4092 aa0.77□□□□□ -2.29
SHE2YKL130C BSC4P53841 131 aa0.77□□□□□ -2.29
SHE2YKL130C ICY1Q04329 127 aa0.77□□□□□ -2.29
SHE2YKL130C MRX7P53869 86 aa0.76□□□□□ -2.29
SHE2YKL130C YBR230W-AQ3E762 66 aa0.76□□□□□ -2.29
SHE2YKL130C YOL097W-AQ3E7Y9 61 aa0.76□□□□□ -2.29
SHE2YKL130C SSS1P35179 80 aa0.74□□□□□ -2.29
SHE2YKL130C RPS29AP41057 56 aaKnown RBP0.74□□□□□ -2.29
SHE2YKL130C RPS29BP41058 56 aaKnown RBP0.74□□□□□ -2.29
SHE2YKL130C PAI3P01094 68 aa0.73□□□□□ -2.29
SHE2YKL130C RSM18P40033 138 aa0.73□□□□□ -2.29
SHE2YKL130C YJR107C-AP0CT86 78 aa0.72□□□□□ -2.29
SHE2YKL130C YML054C-AQ3E809 52 aa0.72□□□□□ -2.29
SHE2YKL130C YDL022C-AP0C5L6 82 aa0.71□□□□□ -2.3
SHE2YKL130C YHR073W-AP0C5N7 58 aa0.7□□□□□ -2.3
SHE2YKL130C YJL133C-AQ3E7A3 74 aa0.7□□□□□ -2.3
SHE2YKL130C YOL164W-AQ3E7A5 60 aa0.7□□□□□ -2.3
SHE2YKL130C YIL134C-AQ45U18 67 aa0.7□□□□□ -2.3
SHE2YKL130C RPL38P49167 78 aaKnown RBP0.69□□□□□ -2.3
SHE2YKL130C ATP18P81450 59 aa0.69□□□□□ -2.3
SHE2YKL130C YIL156W-BQ2V2P4 73 aa0.68□□□□□ -2.3
SHE2YKL130C YFR009W-AP0C5M9 85 aa0.67□□□□□ -2.3
SHE2YKL130C YCR085WP25650 117 aa0.67□□□□□ -2.3
SHE2YKL130C YBR016WP38216 128 aa0.67□□□□□ -2.3
SHE2YKL130C YOR316C-AQ3E806 69 aa0.67□□□□□ -2.3
SHE2YKL130C YFL041W-AQ3E817 63 aa0.67□□□□□ -2.3
SHE2YKL130C EDC1P53080 175 aaPredicted RBP0.66□□□□□ -2.3
SHE2YKL130C OLI1P61829 76 aa0.66□□□□□ -2.3
SHE2YKL130C YIL102C-AQ2V2P5 75 aa0.65□□□□□ -2.31
SHE2YKL130C YDR381C-AQ3E6R5 114 aa0.65□□□□□ -2.31
SHE2YKL130C RPA12P32529 125 aaKnown RBP0.64□□□□□ -2.31
SHE2YKL130C RPS30AP0CX33 63 aaKnown RBP0.63□□□□□ -2.31
SHE2YKL130C RPS30BP0CX34 63 aaKnown RBP0.63□□□□□ -2.31
SHE2YKL130C YSY6P38374 65 aa0.63□□□□□ -2.31
SHE2YKL130C YKL065W-AQ2V2P2 73 aa0.63□□□□□ -2.31
SHE2YKL130C YGR146C-AQ8TGT9 53 aa0.63□□□□□ -2.31
SHE2YKL130C YBL044WP38194 122 aa0.62□□□□□ -2.31
SHE2YKL130C ATX1P38636 73 aa0.62□□□□□ -2.31
SHE2YKL130C YNL198CP40166 100 aa0.62□□□□□ -2.31
SHE2YKL130C YOR314WQ12506 109 aa0.62□□□□□ -2.31
SHE2YKL130C YBR201C-AQ2V2Q3 67 aa0.62□□□□□ -2.31
SHE2YKL130C TOM6P33448 61 aa0.6□□□□□ -2.31
SHE2YKL130C YOR072W-BQ3E832 53 aa0.6□□□□□ -2.31
SHE2YKL130C SDH6Q3E785 79 aa0.59□□□□□ -2.31
SHE2YKL130C YOR394C-AQ8TGJ0 55 aa0.59□□□□□ -2.31
SHE2YKL130C HUB1Q6Q546 73 aa0.58□□□□□ -2.32
SHE2YKL130C ATP17Q06405 101 aa0.57□□□□□ -2.32
SHE2YKL130C YDR182W-AQ3E796 67 aa0.57□□□□□ -2.32
SHE2YKL130C YDR119W-AQ2V2P9 66 aa0.56□□□□□ -2.32
SHE2YKL130C NOP10Q6Q547 58 aaPredicted RBP0.56□□□□□ -2.32
SHE2YKL130C YMR001C-AQ8TGS9 76 aa0.55□□□□□ -2.32
SHE2YKL130C YOL166W-AQ8TGJ1 51 aa0.51□□□□□ -2.33
SHE2YKL130C YHR050W-AQ05451 56 aa0.5□□□□□ -2.33
SHE2YKL130C YCR108CQ3E819 63 aa0.48□□□□□ -2.33
SHE2YKL130C YDR246W-AQ3E763 66 aa0.46□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 76.2 ms