RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C RPS27AP35997 82 aaKnown RBP0.11□□□□□ -2.39
SWI4YER111C TIM12P32830 109 aa0.11□□□□□ -2.39
SWI4YER111C YBR200W-AQ3E755 54 aa0.11□□□□□ -2.39
SWI4YER111C PAU7P39545 55 aa0.11□□□□□ -2.39
SWI4YER111C YFL041W-AQ3E817 63 aa0.11□□□□□ -2.39
SWI4YER111C YCR108CQ3E819 63 aa0.11□□□□□ -2.39
SWI4YER111C YDR246W-AQ3E763 66 aa0.1□□□□□ -2.39
SWI4YER111C YOR394C-AQ8TGJ0 55 aa0.09□□□□□ -2.4
SWI4YER111C SEN1Q00416 2231 aaKnown RBP0.09□□□□□ -2.4
SWI4YER111C PAI3P01094 68 aa0.09□□□□□ -2.4
SWI4YER111C RPS27BP38711 82 aa0.09□□□□□ -2.4
SWI4YER111C ERI1P62651 68 aaKnown RBP0.09□□□□□ -2.4
SWI4YER111C YDR182W-AQ3E796 67 aa0.08□□□□□ -2.4
SWI4YER111C HOR7Q05827 59 aa0.08□□□□□ -2.4
SWI4YER111C Q0017Q9ZZX8 53 aa0.08□□□□□ -2.4
SWI4YER111C SSS1P35179 80 aa0.07□□□□□ -2.4
SWI4YER111C YKL018C-AQ3E7A7 99 aa0.07□□□□□ -2.4
SWI4YER111C YBL039W-BP0C268 59 aa0.07□□□□□ -2.4
SWI4YER111C HUB1Q6Q546 73 aa0.07□□□□□ -2.4
SWI4YER111C BPH1P25356 2167 aa0.07□□□□□ -2.4
SWI4YER111C YLL066W-BQ8TGJ7 56 aa0.07□□□□□ -2.4
SWI4YER111C YMR105W-AQ8TGS8 64 aa0.07□□□□□ -2.4
SWI4YER111C YPR010C-AA5Z2X5 72 aa0.06□□□□□ -2.4
SWI4YER111C SIP18P50263 79 aa0.06□□□□□ -2.4
SWI4YER111C OLI1P61829 76 aa0.06□□□□□ -2.4
SWI4YER111C YLR146W-AQ2V2P1 62 aa0.05□□□□□ -2.4
SWI4YER111C YFR010W-AP0C5N0 62 aa0.05□□□□□ -2.4
SWI4YER111C NCE101Q02820 53 aa0.05□□□□□ -2.4
SWI4YER111C YSY6P38374 65 aa0.03□□□□□ -2.41
SWI4YER111C YOR008C-AQ3E7B9 74 aa0.03□□□□□ -2.41
SWI4YER111C YOL166W-AQ8TGJ1 51 aa0.02□□□□□ -2.41
SWI4YER111C MEC1P38111 2368 aa0.02□□□□□ -2.41
SWI4YER111C RPS30AP0CX33 63 aaKnown RBP0.02□□□□□ -2.41
SWI4YER111C RPS30BP0CX34 63 aaKnown RBP0.02□□□□□ -2.41
SWI4YER111C TOS6P48560 102 aa0.01□□□□□ -2.41
SWI4YER111C YMR001C-AQ8TGS9 76 aa0.01□□□□□ -2.41
SWI4YER111C YIL102C-AQ2V2P5 75 aa0□□□□□ -2.41
SWI4YER111C YBR230W-AQ3E762 66 aa0□□□□□ -2.41
SWI4YER111C YOL131WQ08270 108 aa-0.03□□□□□ -2.41
SWI4YER111C VMA9Q3E7B6 73 aa-0.04□□□□□ -2.42
SWI4YER111C YGR146C-AQ8TGT9 53 aa-0.05□□□□□ -2.42
SWI4YER111C YLR157W-DP0CE99 70 aa-0.06□□□□□ -2.42
SWI4YER111C YKL023C-AQ2V2P3 75 aa-0.08□□□□□ -2.42
SWI4YER111C COX9P07255 59 aa-0.09□□□□□ -2.42
SWI4YER111C YDR034C-AP0C289 58 aa-0.09□□□□□ -2.42
SWI4YER111C COA2Q3E823 68 aa-0.09□□□□□ -2.42
SWI4YER111C RPL39P04650 51 aa-0.1□□□□□ -2.43
SWI4YER111C YHR073W-AP0C5N7 58 aa-0.11□□□□□ -2.43
SWI4YER111C YML054C-AQ3E809 52 aa-0.12□□□□□ -2.43
SWI4YER111C RPL29P05747 59 aaPredicted RBP-0.13□□□□□ -2.43
SWI4YER111C YGL258W-AQ3E740 77 aa-0.13□□□□□ -2.43
SWI4YER111C YLL006W-AQ3E814 58 aa-0.14□□□□□ -2.43
SWI4YER111C YOR192C-CQ3E736 78 aa-0.14□□□□□ -2.43
SWI4YER111C YLR342W-AQ3E810 57 aa-0.16□□□□□ -2.43
SWI4YER111C YOR072W-BQ3E832 53 aa-0.16□□□□□ -2.43
SWI4YER111C TOM7P53507 60 aa-0.17□□□□□ -2.44
SWI4YER111C YHR050W-AQ05451 56 aa-0.18□□□□□ -2.44
SWI4YER111C PMP3P87284 55 aa-0.19□□□□□ -2.44
SWI4YER111C YOR316C-AQ3E806 69 aa-0.24□□□□□ -2.45
SWI4YER111C DDR2P89113 61 aa-0.3□□□□□ -2.46
SWI4YER111C SMX2P40204 77 aaKnown RBP-0.33□□□□□ -2.46
SWI4YER111C YJL133C-AQ3E7A3 74 aa-0.34□□□□□ -2.46
SWI4YER111C YJL127C-BQ3E828 52 aa-0.35□□□□□ -2.47
Retrieved 63 of 5,963 RNA–protein pairs in 11.8 ms