RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W GIS2P53849 153 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
UBP9YER098W DDR2P89113 61 aa3.34□□□□□ -1.87
UBP9YER098W YHR212W-AP0CX91 67 aa3.33□□□□□ -1.88
UBP9YER098W RPL33AP05744 107 aaKnown RBP3.33□□□□□ -1.88
UBP9YER098W RPL33BP41056 107 aaKnown RBP3.33□□□□□ -1.88
UBP9YER098W FYV12Q08559 129 aa3.32□□□□□ -1.88
UBP9YER098W SOM1Q05676 74 aa3.32□□□□□ -1.88
UBP9YER098W YJL197C-AP0C5P0 93 aa3.3□□□□□ -1.88
UBP9YER098W YDL012CQ12489 107 aa3.3□□□□□ -1.88
UBP9YER098W YPR195CQ06594 109 aa3.29□□□□□ -1.88
UBP9YER098W SGF11Q03067 99 aa3.28□□□□□ -1.88
UBP9YER098W YGL014C-AP0C5N1 53 aa3.26□□□□□ -1.89
UBP9YER098W YJR128WP47162 119 aa3.26□□□□□ -1.89
UBP9YER098W YLL066W-BQ8TGJ7 56 aa3.26□□□□□ -1.89
UBP9YER098W MEC1P38111 2368 aa3.24□□□□□ -1.89
UBP9YER098W YBR201C-AQ2V2Q3 67 aa3.24□□□□□ -1.89
UBP9YER098W Q0297Q9ZZV8 51 aa3.24□□□□□ -1.89
UBP9YER098W YGL041C-BQ3E750 60 aa3.23□□□□□ -1.89
UBP9YER098W YBR056W-AI2HB52 66 aa3.22□□□□□ -1.89
UBP9YER098W RTC6O14464 93 aa3.21□□□□□ -1.9
UBP9YER098W RPL43AP0CX25 92 aaKnown RBP3.2□□□□□ -1.9
UBP9YER098W RPL43BP0CX26 92 aa3.2□□□□□ -1.9
UBP9YER098W TEL1P38110 2787 aa3.19□□□□□ -1.9
UBP9YER098W YGR146C-AQ8TGT9 53 aa3.19□□□□□ -1.9
UBP9YER098W YLR255CO13574 117 aa3.18□□□□□ -1.9
UBP9YER098W TOR2P32600 2474 aaKnown RBP3.17□□□□□ -1.9
UBP9YER098W YJL144WP47009 104 aa3.17□□□□□ -1.9
UBP9YER098W YOL097W-AQ3E7Y9 61 aa3.16□□□□□ -1.9
UBP9YER098W COX8P04039 78 aa3.16□□□□□ -1.9
UBP9YER098W YCL042WP25572 119 aa3.16□□□□□ -1.9
UBP9YER098W YEL014CP39999 101 aa3.16□□□□□ -1.9
UBP9YER098W YOR316C-AQ3E806 69 aa3.12□□□□□ -1.91
UBP9YER098W YDR210WQ03482 75 aa3.09□□□□□ -1.91
UBP9YER098W OLI1P61829 76 aa3.09□□□□□ -1.92
UBP9YER098W NUM1Q00402 2748 aa3.08□□□□□ -1.92
UBP9YER098W YHR073W-AP0C5N7 58 aa3.08□□□□□ -1.92
UBP9YER098W RPL37BP51402 88 aaKnown RBP3.08□□□□□ -1.92
UBP9YER098W YCR108CQ3E819 63 aa3.08□□□□□ -1.92
UBP9YER098W YBL044WP38194 122 aa3.07□□□□□ -1.92
UBP9YER098W YDR034C-AP0C289 58 aa3.06□□□□□ -1.92
UBP9YER098W YOR394C-AQ8TGJ0 55 aa3.05□□□□□ -1.92
UBP9YER098W YBR016WP38216 128 aa3.04□□□□□ -1.92
UBP9YER098W CMC4Q3E7A9 73 aa3.04□□□□□ -1.92
UBP9YER098W YHR086W-AQ3E746 53 aa2.96□□□□□ -1.94
UBP9YER098W TOR1P35169 2470 aa2.93□□□□□ -1.94
UBP9YER098W COX7P10174 60 aa2.89□□□□□ -1.95
UBP9YER098W LCL1Q02786 101 aa2.86□□□□□ -1.95
UBP9YER098W RPL37AP49166 88 aaKnown RBP2.78□□□□□ -1.96
UBP9YER098W HHY1P39982 102 aa2.77□□□□□ -1.97
UBP9YER098W YJL009WP47078 108 aa2.72□□□□□ -1.97
UBP9YER098W YBR072C-AQ3E794 53 aa2.72□□□□□ -1.97
UBP9YER098W DYN1P36022 4092 aa2.71□□□□□ -1.98
UBP9YER098W YOR072W-BQ3E832 53 aa2.71□□□□□ -1.98
UBP9YER098W YML054C-AQ3E809 52 aa2.52□□□□□ -2.01
UBP9YER098W Q0017Q9ZZX8 53 aa2.44□□□□□ -2.02
UBP9YER098W CUP1-1P0CX80 61 aa2.43□□□□□ -2.02
UBP9YER098W CUP1-2P0CX81 61 aa2.43□□□□□ -2.02
UBP9YER098W YOL164W-AQ3E7A5 60 aa2.41□□□□□ -2.02
UBP9YER098W MDN1Q12019 4910 aaKnown RBP2.13□□□□□ -2.07
UBP9YER098W YHR050W-AQ05451 56 aa2.11□□□□□ -2.07
UBP9YER098W YLR157W-EP0CF00 54 aa2□□□□□ -2.09
UBP9YER098W RPS29AP41057 56 aaKnown RBP1.89□□□□□ -2.11
UBP9YER098W RPS29BP41058 56 aaKnown RBP1.69□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 36 ms