RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C KSH1Q8TGJ3 72 aa1.93□□□□□ -2.1
CDC40YDR364C SOM1Q05676 74 aa1.92□□□□□ -2.1
CDC40YDR364C YOR314WQ12506 109 aa1.92□□□□□ -2.1
CDC40YDR364C KTI11Q3E840 82 aa1.92□□□□□ -2.1
CDC40YDR364C RPL36AP05745 100 aaPredicted RBP1.91□□□□□ -2.1
CDC40YDR364C YHL005CP38752 130 aa1.91□□□□□ -2.1
CDC40YDR364C YIL102CP40488 101 aa1.91□□□□□ -2.1
CDC40YDR364C YPR153WQ06537 140 aa1.91□□□□□ -2.1
CDC40YDR364C YPL038W-AQ3E7B4 63 aa1.91□□□□□ -2.1
CDC40YDR364C YEL014CP39999 101 aa1.89□□□□□ -2.11
CDC40YDR364C COX7P10174 60 aa1.88□□□□□ -2.11
CDC40YDR364C QCR10P37299 77 aa1.88□□□□□ -2.11
CDC40YDR364C YER187WP40102 141 aa1.88□□□□□ -2.11
CDC40YDR364C NOP10Q6Q547 58 aaPredicted RBP1.88□□□□□ -2.11
CDC40YDR364C YHR073W-AP0C5N7 58 aa1.87□□□□□ -2.11
CDC40YDR364C TOM6P33448 61 aa1.87□□□□□ -2.11
CDC40YDR364C AIM4P38305 123 aaPredicted RBP1.87□□□□□ -2.11
CDC40YDR364C YDR246W-AQ3E763 66 aa1.86□□□□□ -2.11
CDC40YDR364C CMC4Q3E7A9 73 aa1.86□□□□□ -2.11
CDC40YDR364C YOL013W-AP0C272 63 aaPredicted RBP1.85□□□□□ -2.11
CDC40YDR364C YDR182W-AQ3E796 67 aa1.85□□□□□ -2.11
CDC40YDR364C YOL166W-AQ8TGJ1 51 aa1.85□□□□□ -2.11
CDC40YDR364C YNL122CP53921 115 aaPredicted RBP1.84□□□□□ -2.12
CDC40YDR364C YOR376W-AQ3E805 51 aa1.84□□□□□ -2.12
CDC40YDR364C YOR316C-AQ3E806 69 aa1.84□□□□□ -2.12
CDC40YDR364C YJR128WP47162 119 aa1.83□□□□□ -2.12
CDC40YDR364C YGR164WP53291 111 aa1.82□□□□□ -2.12
CDC40YDR364C RPS30AP0CX33 63 aaKnown RBP1.81□□□□□ -2.12
CDC40YDR364C RPS30BP0CX34 63 aaKnown RBP1.81□□□□□ -2.12
CDC40YDR364C YLR255CO13574 117 aa1.79□□□□□ -2.12
CDC40YDR364C YKL065W-AQ2V2P2 73 aa1.79□□□□□ -2.12
CDC40YDR364C SDH6Q3E785 79 aa1.79□□□□□ -2.12
CDC40YDR364C YGR146C-AQ8TGT9 53 aa1.79□□□□□ -2.12
CDC40YDR364C OLI1P61829 76 aa1.76□□□□□ -2.13
CDC40YDR364C OST5Q92316 86 aa1.76□□□□□ -2.13
CDC40YDR364C YBR016WP38216 128 aa1.75□□□□□ -2.13
CDC40YDR364C RPL37BP51402 88 aaKnown RBP1.75□□□□□ -2.13
CDC40YDR364C YBR201C-AQ2V2Q3 67 aa1.75□□□□□ -2.13
CDC40YDR364C YMR001C-AQ8TGS9 76 aa1.75□□□□□ -2.13
CDC40YDR364C YIL156W-BQ2V2P4 73 aa1.74□□□□□ -2.13
CDC40YDR364C HUB1Q6Q546 73 aa1.74□□□□□ -2.13
CDC40YDR364C YGL014C-AP0C5N1 53 aa1.72□□□□□ -2.13
CDC40YDR364C MRX7P53869 86 aa1.72□□□□□ -2.13
CDC40YDR364C Q0017Q9ZZX8 53 aa1.72□□□□□ -2.13
CDC40YDR364C YMR122CQ03879 124 aa1.71□□□□□ -2.14
CDC40YDR364C YJL009WP47078 108 aa1.68□□□□□ -2.14
CDC40YDR364C YCR095W-AQ3E787 52 aa1.68□□□□□ -2.14
CDC40YDR364C YER188C-AP0C0V2 99 aa1.65□□□□□ -2.15
CDC40YDR364C YBL044WP38194 122 aa1.64□□□□□ -2.15
CDC40YDR364C YML054C-AQ3E809 52 aa1.64□□□□□ -2.15
CDC40YDR364C YDR210WQ03482 75 aa1.62□□□□□ -2.15
CDC40YDR364C ATP17Q06405 101 aa1.62□□□□□ -2.15
CDC40YDR364C YOR394C-AQ8TGJ0 55 aa1.62□□□□□ -2.15
CDC40YDR364C YCR108CQ3E819 63 aa1.56□□□□□ -2.16
CDC40YDR364C RPL37AP49166 88 aaKnown RBP1.53□□□□□ -2.16
CDC40YDR364C YOR072W-BQ3E832 53 aa1.5□□□□□ -2.17
CDC40YDR364C HHY1P39982 102 aa1.43□□□□□ -2.18
CDC40YDR364C RPS29BP41058 56 aaKnown RBP1.41□□□□□ -2.18
CDC40YDR364C YBR072C-AQ3E794 53 aa1.38□□□□□ -2.19
CDC40YDR364C RPS29AP41057 56 aaKnown RBP1.35□□□□□ -2.19
CDC40YDR364C YHR050W-AQ05451 56 aa1.23□□□□□ -2.21
CDC40YDR364C YLR157W-EP0CF00 54 aa1.22□□□□□ -2.21
CDC40YDR364C YOL164W-AQ3E7A5 60 aa1.08□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 60 ms