RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C ICS3P47034 131 aa0.54□□□□□ -2.32
SHG1YBR258C YLR285C-AQ3E771 56 aa0.54□□□□□ -2.32
SHG1YBR258C YHR130CP38834 111 aa0.53□□□□□ -2.32
SHG1YBR258C TDA2P40045 126 aa0.53□□□□□ -2.32
SHG1YBR258C SNN1P48232 102 aa0.51□□□□□ -2.33
SHG1YBR258C POP7P38291 140 aa0.5□□□□□ -2.33
SHG1YBR258C COX23P38824 151 aa0.49□□□□□ -2.33
SHG1YBR258C SLO1Q3E784 85 aa0.49□□□□□ -2.33
SHG1YBR258C OST5Q92316 86 aa0.49□□□□□ -2.33
SHG1YBR258C VMA9Q3E7B6 73 aa0.47□□□□□ -2.33
SHG1YBR258C YLR363W-AQ3E747 85 aa0.46□□□□□ -2.34
SHG1YBR258C YOL164W-AQ3E7A5 60 aa0.46□□□□□ -2.34
SHG1YBR258C RPS30AP0CX33 63 aaKnown RBP0.44□□□□□ -2.34
SHG1YBR258C RPS30BP0CX34 63 aaKnown RBP0.44□□□□□ -2.34
SHG1YBR258C YOR304C-AO14468 76 aa0.43□□□□□ -2.34
SHG1YBR258C YFR009W-AP0C5M9 85 aa0.43□□□□□ -2.34
SHG1YBR258C YIL156W-BQ2V2P4 73 aa0.43□□□□□ -2.34
SHG1YBR258C SRB6P32570 121 aa0.42□□□□□ -2.34
SHG1YBR258C VMA21P41806 77 aa0.42□□□□□ -2.34
SHG1YBR258C HUR1P45820 110 aa0.42□□□□□ -2.34
SHG1YBR258C YJR107C-AP0CT86 78 aa0.41□□□□□ -2.34
SHG1YBR258C ATP18P81450 59 aa0.4□□□□□ -2.35
SHG1YBR258C YBR072C-AQ3E794 53 aa0.4□□□□□ -2.35
SHG1YBR258C YGR146C-AQ8TGT9 53 aa0.4□□□□□ -2.35
SHG1YBR258C RPA12P32529 125 aaKnown RBP0.38□□□□□ -2.35
SHG1YBR258C MSL1P40567 111 aaPredicted RBP0.38□□□□□ -2.35
SHG1YBR258C GTT1P40582 234 aa0.37□□□□□ -2.35
SHG1YBR258C OLI1P61829 76 aa0.37□□□□□ -2.35
SHG1YBR258C LSM6Q06406 86 aaKnown RBP0.36□□□□□ -2.35
SHG1YBR258C YKL065W-AQ2V2P2 73 aa0.35□□□□□ -2.35
SHG1YBR258C YDR381C-AQ3E6R5 114 aa0.35□□□□□ -2.35
SHG1YBR258C RPL38P49167 78 aaKnown RBP0.33□□□□□ -2.36
SHG1YBR258C ZEO1Q08245 113 aa0.33□□□□□ -2.36
SHG1YBR258C YOR072W-BQ3E832 53 aa0.31□□□□□ -2.36
SHG1YBR258C YOR394C-AQ8TGJ0 55 aa0.31□□□□□ -2.36
SHG1YBR258C MRX7P53869 86 aa0.29□□□□□ -2.36
SHG1YBR258C RUB1Q03919 77 aa0.29□□□□□ -2.36
SHG1YBR258C SSS1P35179 80 aa0.28□□□□□ -2.36
SHG1YBR258C YHR050W-AQ05451 56 aa0.27□□□□□ -2.37
SHG1YBR258C YPL038W-AQ3E7B4 63 aa0.27□□□□□ -2.37
SHG1YBR258C PAI3P01094 68 aa0.25□□□□□ -2.37
SHG1YBR258C YIR021W-AQ3E739 70 aa0.24□□□□□ -2.37
SHG1YBR258C YBR201C-AQ2V2Q3 67 aa0.21□□□□□ -2.38
SHG1YBR258C YIL134C-AQ45U18 67 aa0.21□□□□□ -2.38
SHG1YBR258C YCR085WP25650 117 aa0.19□□□□□ -2.38
SHG1YBR258C YCR095W-AQ3E787 52 aa0.19□□□□□ -2.38
SHG1YBR258C ATP17Q06405 101 aa0.17□□□□□ -2.38
SHG1YBR258C YDR119W-AQ2V2P9 66 aa0.17□□□□□ -2.38
SHG1YBR258C YFL041W-AQ3E817 63 aa0.17□□□□□ -2.38
SHG1YBR258C ATX1P38636 73 aa0.15□□□□□ -2.39
SHG1YBR258C YNL198CP40166 100 aa0.15□□□□□ -2.39
SHG1YBR258C YIL102C-AQ2V2P5 75 aa0.11□□□□□ -2.39
SHG1YBR258C YOR314WQ12506 109 aa0.1□□□□□ -2.39
SHG1YBR258C YCR108CQ3E819 63 aa0.1□□□□□ -2.39
SHG1YBR258C NOP10Q6Q547 58 aaPredicted RBP0.1□□□□□ -2.39
SHG1YBR258C YSY6P38374 65 aa0.09□□□□□ -2.4
SHG1YBR258C SDH6Q3E785 79 aa0.08□□□□□ -2.4
SHG1YBR258C HUB1Q6Q546 73 aa0.06□□□□□ -2.4
SHG1YBR258C YOL166W-AQ8TGJ1 51 aa0.06□□□□□ -2.4
SHG1YBR258C YMR001C-AQ8TGS9 76 aa0.04□□□□□ -2.4
SHG1YBR258C YDR182W-AQ3E796 67 aa-0.01□□□□□ -2.41
SHG1YBR258C YDR246W-AQ3E763 66 aa-0.04□□□□□ -2.42
SHG1YBR258C TOM6P33448 61 aa-0.16□□□□□ -2.44
Retrieved 63 of 5,963 RNA–protein pairs in 23.4 ms