RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W YLR255CO13574 117 aa3□□□□□ -1.93
VHC1YBR235W COX8P04039 78 aa3□□□□□ -1.93
VHC1YBR235W GIS2P53849 153 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
VHC1YBR235W MEC1P38111 2368 aa2.99□□□□□ -1.93
VHC1YBR235W RPC10P40422 70 aa2.99□□□□□ -1.93
VHC1YBR235W TAO3P40468 2376 aa2.99□□□□□ -1.93
VHC1YBR235W RPL33BP41056 107 aaKnown RBP2.98□□□□□ -1.93
VHC1YBR235W TRA1P38811 3744 aa2.97□□□□□ -1.93
VHC1YBR235W HOR7Q05827 59 aa2.95□□□□□ -1.94
VHC1YBR235W UTP20P35194 2493 aaKnown RBP2.94□□□□□ -1.94
VHC1YBR235W YCR108CQ3E819 63 aa2.92□□□□□ -1.94
VHC1YBR235W YBL044WP38194 122 aa2.92□□□□□ -1.94
VHC1YBR235W YPR195CQ06594 109 aa2.92□□□□□ -1.94
VHC1YBR235W YGR146C-AQ8TGT9 53 aa2.92□□□□□ -1.94
VHC1YBR235W YHR032W-AP0C5N6 59 aa2.91□□□□□ -1.94
VHC1YBR235W YOL097W-AQ3E7Y9 61 aa2.91□□□□□ -1.94
VHC1YBR235W YOR394C-AQ8TGJ0 55 aa2.9□□□□□ -1.94
VHC1YBR235W YJR085CP47131 105 aaKnown RBP2.9□□□□□ -1.95
VHC1YBR235W YGR240C-AQ3E786 66 aa2.89□□□□□ -1.95
VHC1YBR235W YGL041C-BQ3E750 60 aa2.89□□□□□ -1.95
VHC1YBR235W RDS3Q06835 107 aaPredicted RBP2.88□□□□□ -1.95
VHC1YBR235W RPL33AP05744 107 aaKnown RBP2.87□□□□□ -1.95
VHC1YBR235W YDR034W-BQ6Q5X2 51 aa2.86□□□□□ -1.95
VHC1YBR235W FMP27Q06179 2628 aa2.85□□□□□ -1.95
VHC1YBR235W YJL144WP47009 104 aa2.84□□□□□ -1.95
VHC1YBR235W YLR122CQ12312 125 aa2.84□□□□□ -1.95
VHC1YBR235W OLI1P61829 76 aa2.83□□□□□ -1.96
VHC1YBR235W RPL37BP51402 88 aaKnown RBP2.83□□□□□ -1.96
VHC1YBR235W YOR316C-AQ3E806 69 aa2.83□□□□□ -1.96
VHC1YBR235W YHR212W-AP0CX91 67 aa2.82□□□□□ -1.96
VHC1YBR235W YLL066W-BQ8TGJ7 56 aa2.81□□□□□ -1.96
VHC1YBR235W LCL1Q02786 101 aa2.8□□□□□ -1.96
VHC1YBR235W YPR117WQ06116 2489 aa2.8□□□□□ -1.96
VHC1YBR235W COX7P10174 60 aa2.79□□□□□ -1.96
VHC1YBR235W YAL067W-AQ8TGK6 75 aa2.79□□□□□ -1.96
VHC1YBR235W YGL260WP53056 76 aa2.77□□□□□ -1.97
VHC1YBR235W YBR016WP38216 128 aa2.76□□□□□ -1.97
VHC1YBR235W YHR073W-AP0C5N7 58 aa2.72□□□□□ -1.97
VHC1YBR235W HHY1P39982 102 aa2.63□□□□□ -1.99
VHC1YBR235W Q0297Q9ZZV8 51 aa2.63□□□□□ -1.99
VHC1YBR235W YDR034C-AP0C289 58 aa2.62□□□□□ -1.99
VHC1YBR235W TOR2P32600 2474 aaKnown RBP2.62□□□□□ -1.99
VHC1YBR235W NUM1Q00402 2748 aa2.61□□□□□ -1.99
VHC1YBR235W YFL067WP43537 175 aa2.6□□□□□ -1.99
VHC1YBR235W YJL009WP47078 108 aa2.6□□□□□ -1.99
VHC1YBR235W YBR056W-AI2HB52 66 aa2.59□□□□□ -1.99
VHC1YBR235W TEL1P38110 2787 aa2.55□□□□□ -2
VHC1YBR235W RPL37AP49166 88 aaKnown RBP2.55□□□□□ -2
VHC1YBR235W YBR072C-AQ3E794 53 aa2.53□□□□□ -2
VHC1YBR235W YOR072W-BQ3E832 53 aa2.49□□□□□ -2.01
VHC1YBR235W TOR1P35169 2470 aa2.46□□□□□ -2.02
VHC1YBR235W CUP1-1P0CX80 61 aa2.43□□□□□ -2.02
VHC1YBR235W CUP1-2P0CX81 61 aa2.43□□□□□ -2.02
VHC1YBR235W DYN1P36022 4092 aa2.41□□□□□ -2.02
VHC1YBR235W YOL164W-AQ3E7A5 60 aa2.38□□□□□ -2.03
VHC1YBR235W YHR086W-AQ3E746 53 aa2.19□□□□□ -2.06
VHC1YBR235W YML054C-AQ3E809 52 aa2.19□□□□□ -2.06
VHC1YBR235W MDN1Q12019 4910 aaKnown RBP2.08□□□□□ -2.08
VHC1YBR235W Q0017Q9ZZX8 53 aa2.07□□□□□ -2.08
VHC1YBR235W YLR157W-EP0CF00 54 aa2.06□□□□□ -2.08
VHC1YBR235W YHR050W-AQ05451 56 aa1.9□□□□□ -2.11
VHC1YBR235W RPS29AP41057 56 aaKnown RBP1.73□□□□□ -2.13
VHC1YBR235W RPS29BP41058 56 aaKnown RBP1.66□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 24.1 ms