RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YLL006W-AQ3E814 58 aa2.92□□□□□ -1.94
SEC18YBR080C YOR011W-AQ3E807 68 aa2.91□□□□□ -1.94
SEC18YBR080C RPL38P49167 78 aaKnown RBP2.9□□□□□ -1.94
SEC18YBR080C YOL097W-AQ3E7Y9 61 aa2.9□□□□□ -1.94
SEC18YBR080C YIL102CP40488 101 aa2.9□□□□□ -1.95
SEC18YBR080C RPL29P05747 59 aaPredicted RBP2.89□□□□□ -1.95
SEC18YBR080C YFR009W-AP0C5M9 85 aa2.88□□□□□ -1.95
SEC18YBR080C VPS13Q07878 3144 aa2.86□□□□□ -1.95
SEC18YBR080C HOR7Q05827 59 aa2.85□□□□□ -1.95
SEC18YBR080C YBL039W-BP0C268 59 aa2.84□□□□□ -1.95
SEC18YBR080C YHR213W-BQ8TGK1 99 aa2.83□□□□□ -1.96
SEC18YBR080C YPR010C-AA5Z2X5 72 aa2.81□□□□□ -1.96
SEC18YBR080C YMR001C-AQ8TGS9 76 aa2.81□□□□□ -1.96
SEC18YBR080C YLR157W-DP0CE99 70 aa2.81□□□□□ -1.96
SEC18YBR080C YBR072C-AQ3E794 53 aa2.81□□□□□ -1.96
SEC18YBR080C YJL127C-BQ3E828 52 aa2.8□□□□□ -1.96
SEC18YBR080C YBR230W-AQ3E762 66 aa2.79□□□□□ -1.96
SEC18YBR080C YJL133C-AQ3E7A3 74 aa2.79□□□□□ -1.96
SEC18YBR080C YLR307C-AQ3E825 87 aa2.79□□□□□ -1.96
SEC18YBR080C YDR034W-BQ6Q5X2 51 aa2.79□□□□□ -1.96
SEC18YBR080C IRA2P19158 3079 aa2.76□□□□□ -1.97
SEC18YBR080C CSF1Q12150 2958 aa2.76□□□□□ -1.97
SEC18YBR080C DDR2P89113 61 aa2.73□□□□□ -1.97
SEC18YBR080C FMP27Q06179 2628 aa2.72□□□□□ -1.97
SEC18YBR080C RPL43AP0CX25 92 aaKnown RBP2.7□□□□□ -1.98
SEC18YBR080C RPL43BP0CX26 92 aa2.7□□□□□ -1.98
SEC18YBR080C YOR394C-AQ8TGJ0 55 aa2.67□□□□□ -1.98
SEC18YBR080C YOL164W-AQ3E7A5 60 aa2.66□□□□□ -1.98
SEC18YBR080C Q0297Q9ZZV8 51 aa2.66□□□□□ -1.98
SEC18YBR080C IRA1P18963 3092 aa2.63□□□□□ -1.99
SEC18YBR080C GCN1P33892 2672 aaKnown RBP2.62□□□□□ -1.99
SEC18YBR080C YPR117WQ06116 2489 aa2.62□□□□□ -1.99
SEC18YBR080C YLR157W-EP0CF00 54 aa2.62□□□□□ -1.99
SEC18YBR080C YLL066W-BQ8TGJ7 56 aa2.62□□□□□ -1.99
SEC18YBR080C YGR146C-AQ8TGT9 53 aa2.56□□□□□ -2
SEC18YBR080C TRA1P38811 3744 aa2.56□□□□□ -2
SEC18YBR080C RPL37AP49166 88 aaKnown RBP2.54□□□□□ -2
SEC18YBR080C OLI1P61829 76 aa2.54□□□□□ -2
SEC18YBR080C YHR073W-AP0C5N7 58 aa2.53□□□□□ -2
SEC18YBR080C PRP8P33334 2413 aaKnown RBP2.51□□□□□ -2.01
SEC18YBR080C TOR2P32600 2474 aaKnown RBP2.51□□□□□ -2.01
SEC18YBR080C YDR034C-AP0C289 58 aa2.49□□□□□ -2.01
SEC18YBR080C UTP20P35194 2493 aaKnown RBP2.49□□□□□ -2.01
SEC18YBR080C YOR316C-AQ3E806 69 aa2.48□□□□□ -2.01
SEC18YBR080C YBR056W-AI2HB52 66 aa2.47□□□□□ -2.01
SEC18YBR080C YBR016WP38216 128 aa2.47□□□□□ -2.01
SEC18YBR080C RPL37BP51402 88 aaKnown RBP2.47□□□□□ -2.01
SEC18YBR080C YCR108CQ3E819 63 aa2.44□□□□□ -2.02
SEC18YBR080C MEC1P38111 2368 aa2.42□□□□□ -2.02
SEC18YBR080C YBL044WP38194 122 aa2.42□□□□□ -2.02
SEC18YBR080C TEL1P38110 2787 aa2.38□□□□□ -2.03
SEC18YBR080C NUM1Q00402 2748 aa2.29□□□□□ -2.04
SEC18YBR080C TOR1P35169 2470 aa2.26□□□□□ -2.05
SEC18YBR080C YOR072W-BQ3E832 53 aa2.23□□□□□ -2.05
SEC18YBR080C YML054C-AQ3E809 52 aa2.17□□□□□ -2.06
SEC18YBR080C Q0017Q9ZZX8 53 aa2.14□□□□□ -2.07
SEC18YBR080C DYN1P36022 4092 aa2.12□□□□□ -2.07
SEC18YBR080C CUP1-1P0CX80 61 aa2.06□□□□□ -2.08
SEC18YBR080C CUP1-2P0CX81 61 aa2.06□□□□□ -2.08
SEC18YBR080C RPS29BP41058 56 aaKnown RBP2□□□□□ -2.09
SEC18YBR080C YHR050W-AQ05451 56 aa1.78□□□□□ -2.13
SEC18YBR080C RPS29AP41057 56 aaKnown RBP1.64□□□□□ -2.15
SEC18YBR080C MDN1Q12019 4910 aaKnown RBP1.64□□□□□ -2.15
Retrieved 63 of 5,963 RNA–protein pairs in 25.1 ms