RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 AVPR1AP37288 418 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 BST2Q10589 180 aaKnown RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PCYOX1LQ8NBM8 494 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 EDEM1Q92611 657 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CAVIN3Q969G5 261 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 SLC40A1Q9NP59 571 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 RNF19AQ9NV58 838 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 RAB21Q9UL25 225 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PRPF4O43172 522 aaKnown RBP eCLIP12.93□□□□□ -0.346e-7■■■■□ 21.5
TNFAIP3-206ENST00000612899 AKAP10O43572 662 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ADORA2AP29274 412 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 BMPR2Q13873 1038 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PTK2BQ14289 1009 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 SYTL3Q4VX76 610 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 EME1Q96AY2 570 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 NAT9Q9BTE0 207 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 POMCP01189 267 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CALCAP01258 141 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 RPL21P46778 160 aaKnown RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 GEMP55040 296 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CDH18Q13634 790 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PRUNE1Q86TP1 453 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 SCUBE3Q8IX30 993 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 KAT2BQ92831 832 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ASB7Q9H672 318 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 LRRC40Q9H9A6 602 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 COG4Q9H9E3 785 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 H0Y626 953 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PJA2O43164 708 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CYP2F1P24903 491 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 SLC11A2P49281 568 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 MED21Q13503 144 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 WDR59Q6PJI9 974 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ADCK2Q7Z695 626 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 YAF2Q8IY57 180 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 KIRREL3Q8IZU9 778 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 CINPQ9BW66 212 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 DCLK3Q9C098 648 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 NAALADL1Q9UQQ1 740 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 SERPIND1P05546 499 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 CTXN3Q4LDR2 81 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 SLC26A11Q86WA9 606 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 PCDH9Q9HC56 1237 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 TAS2R14Q9NYV8 317 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 PLSCR1O15162 318 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 GLRA3O75311 464 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 UBA1P22314 1058 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 INPP5AQ14642 412 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 CEP19Q96LK0 163 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 TSC22D4Q9Y3Q8 395 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 PCDHA3Q9Y5H8 950 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 ADCYAP1R1P41586 468 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 LHX1P48742 406 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 MIIPQ5JXC2 388 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 PAPOLBQ9NRJ5 636 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 CRLS1Q9UJA2 301 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
TNFAIP3-206ENST00000612899 CFAP99D6REC4 459 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 STRNO43815 780 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 CELF6Q96J87 481 aaKnown RBP12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 HAO1Q9UJM8 370 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 AAR2Q9Y312 384 aaKnown RBP12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 SASH3O75995 380 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 CKMP06732 381 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 ITGB5P18084 799 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 SSTR1P30872 391 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 ADIGQ0VDE8 80 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 FUT2Q10981 343 aa12.91□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF268Q14587 947 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms