RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TMEM196Q5HYL7 178 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 ASCL5Q7RTU5 278 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 PIGZQ86VD9 579 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 TTC30AQ86WT1 665 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 ARHGEF19Q8IW93 802 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 SPEM1Q8N4L4 309 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 LMO3Q8TAP4 145 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 UBA3Q8TBC4 463 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 ATRIPQ8WXE1 791 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 CD101Q93033 1021 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 MED15Q96RN5 788 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 IER2Q9BTL4 223 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 INTS2Q9H0H0 1204 aaKnown RBP17.52■□□□□ 0.4
SREBF1-219ENST00000580540 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 FBRSL1Q9HCM7 1045 aaKnown RBP17.52■□□□□ 0.4
SREBF1-219ENST00000580540 OSER1Q9NX31 292 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 ZFHX2Q9C0A1 2572 aaPredicted RBP17.52■□□□□ 0.39
SREBF1-219ENST00000580540 MDM4O15151 490 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 ATP5C1P36542 298 aaKnown RBP17.51■□□□□ 0.39
SREBF1-219ENST00000580540 PDE4CQ08493 712 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 ZNF528Q3MIS6 628 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 DPCR1Q3MIW9 517 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 C10orf120Q5SQS8 335 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 SYNPOQ8N3V7 929 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 UBR7Q8N806 425 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
SREBF1-219ENST00000580540 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
SREBF1-219ENST00000580540 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 PRMT8Q9NR22 394 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-219ENST00000580540 TBC1D14Q9P2M4 693 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 MYO16Q9Y6X6 1858 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 PATJQ8NI35 1801 aa17.51■□□□□ 0.39
SREBF1-219ENST00000580540 E2F8A0AVK6 867 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 PRR23AA6NEV1 266 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 GOLGA6L22H0YM25 854 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 RNF225M0QZC1 329 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-219ENST00000580540 TULP2O00295 520 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 CALCAP01258 141 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 CYP17A1P05093 508 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 RALAP11233 206 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 KRT5P13647 590 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 DRD1P21728 446 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 BCAT1P54687 386 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 DHCR24Q15392 516 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 SCD5Q86SK9 330 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 ADGRG2Q8IZP9 1017 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 RBBP8NLQ8NC74 664 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-219ENST00000580540 WBP2Q969T9 261 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 UBXN6Q9BZV1 441 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 LRRC4Q9HBW1 653 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-219ENST00000580540 ZSCAN32Q9NX65 697 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 DACH1Q9UI36 760 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 KIAA1257Q9ULG3 409 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 USP3Q9Y6I4 520 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 ATG2BQ96BY7 2078 aa17.5■□□□□ 0.39
SREBF1-219ENST00000580540 RNF40O75150 1001 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 PAEPP09466 180 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
SREBF1-219ENST00000580540 PSEN1P49768 467 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 TKTL1P51854 596 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 BST2Q10589 180 aaKnown RBP17.49■□□□□ 0.39
SREBF1-219ENST00000580540 HSP90AA4PQ58FG1 418 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 HEATR6Q6AI08 1181 aaKnown RBP17.49■□□□□ 0.39
SREBF1-219ENST00000580540 TADA2BQ86TJ2 420 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 TFAP2BQ92481 460 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 NDRG1Q92597 394 aaKnown RBP17.49■□□□□ 0.39
SREBF1-219ENST00000580540 KLF16Q9BXK1 252 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-219ENST00000580540 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 SEMA4AQ9H3S1 761 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 CYLDQ9NQC7 956 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■□□□□ 11.1
SREBF1-219ENST00000580540 C2orf42Q9NWW7 574 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 DNMT3LQ9UJW3 386 aa17.49■□□□□ 0.39
SREBF1-219ENST00000580540 O00370 1275 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 XPO1O14980 1071 aaKnown RBP17.48■□□□□ 0.39
SREBF1-219ENST00000580540 ADH1CP00326 375 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
SREBF1-219ENST00000580540 GCNT1Q02742 428 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 EFEMP1Q12805 493 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 LY6G5CQ5SRR4 150 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 PKN3Q6P5Z2 889 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 RHBDF2Q6PJF5 856 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 MAMSTRQ6ZN01 415 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 GBP6Q6ZN66 633 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 RSRC2Q7L4I2 434 aaKnown RBP17.48■□□□□ 0.39
SREBF1-219ENST00000580540 MIB1Q86YT6 1006 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 IRF2BP1Q8IU81 584 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 KIAA1958Q8N8K9 716 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 GPT2Q8TD30 523 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 KREMEN1Q96MU8 473 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 THAP9Q9H5L6 903 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 RASAL2Q9UJF2 1139 aa17.48■□□□□ 0.39
SREBF1-219ENST00000580540 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms