RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 NFATC1O95644 943 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 MBD3O95983 291 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 KRT5P13647 590 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 ATP5C1P36542 298 aaKnown RBP16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 NBL1P41271 181 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 GAS6Q14393 721 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 C10orf120Q5SQS8 335 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 FSTL4Q6MZW2 842 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 GJB7Q6PEY0 223 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 SCD5Q86SK9 330 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 DDX42Q86XP3 938 aaKnown RBP eCLIP16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 ADGRG2Q8IZP9 1017 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 RBBP8NLQ8NC74 664 aaPredicted RBP16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 NDRG1Q92597 394 aaKnown RBP16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 KREMEN1Q96MU8 473 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 P2RY13Q9BPV8 354 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 FBXO4Q9UKT5 387 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 ANAPC1Q9H1A4 1944 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 CACNA1IQ9P0X4 2223 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 COL4A2P08572 1712 aa16.42■□□□□ 0.22
AC009088.3-201ENST00000563605 MIA3Q5JRA6 1907 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 O00370 1275 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 TRDMT1O14717 391 aaKnown RBP16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 SLC9A3R1O14745 358 aaPredicted RBP16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 EGFP01133 1207 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 SLC9A1P19634 815 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 BRD2P25440 801 aaKnown RBP16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 CXCL12P48061 93 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 TUBP50607 506 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 TKTL1P51854 596 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 SATB1Q01826 763 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 APBA1Q02410 837 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 TMEM196Q5HYL7 178 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 CD101Q93033 1021 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 NKD2Q969F2 451 aaPredicted RBP16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 LRRC4Q9HBW1 653 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 USP3Q9Y6I4 520 aa16.41■□□□□ 0.22
AC009088.3-201ENST00000563605 MYH10P35580 1976 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 E2F8A0AVK6 867 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 PIK3R2O00459 728 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 GFRA3O60609 400 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 CYP17A1P05093 508 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 PAEPP09466 180 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 RALAP11233 206 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 USP8P40818 1118 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 RGS7P49802 495 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 BCAT1P54687 386 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 GCNT1Q02742 428 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 BST2Q10589 180 aaKnown RBP16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 CCINQ13939 588 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 DHCR24Q15392 516 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ARHGAP44Q17R89 818 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 RHBDF2Q6PJF5 856 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ASCL5Q7RTU5 278 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 CCDC186Q7Z3E2 898 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 BBS7Q8IWZ6 715 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 SPEM1Q8N4L4 309 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 KLF16Q9BXK1 252 aaPredicted RBP16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ULBP1Q9BZM6 244 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
AC009088.3-201ENST00000563605 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.22
AC009088.3-201ENST00000563605 PES1O00541 588 aaKnown RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 ZBED1O96006 694 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 HMBSP08397 361 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 LCP1P13796 627 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 HOXC13P31276 330 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 SLC6A11P48066 632 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 CCR3P51677 355 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 EFEMP1Q12805 493 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 CNGA2Q16280 664 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 LY6G5CQ5SRR4 150 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 PKN3Q6P5Z2 889 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 LCLAT1Q6UWP7 414 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 FAM114A1Q8IWE2 563 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 CYLDQ9NQC7 956 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 RASAL2Q9UJF2 1139 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 DNMT3LQ9UJW3 386 aa16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 KIF26AQ9ULI4 1882 aaPredicted RBP16.39■□□□□ 0.21
AC009088.3-201ENST00000563605 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
AC009088.3-201ENST00000563605 M0QYV0 167 aa16.38■□□□□ 0.21
AC009088.3-201ENST00000563605 RNF40O75150 1001 aa16.38■□□□□ 0.21
AC009088.3-201ENST00000563605 DRD1P21728 446 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms