RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC11A1P49279 550 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 DAOAP59103 153 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 GPS2Q13227 327 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 TFDP2Q14188 446 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
TPM1-215ENST00000558868 KRT81Q14533 505 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 CDO1Q16878 200 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 CCDC142Q17RM4 750 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 KAZNQ674X7 775 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 DUPD1Q68J44 220 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 TXNRD3NBQ6F5E7 133 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 SCYL2Q6P3W7 929 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 DRICH1Q6PGQ1 229 aaPredicted RBP14.4□□□□□ -0.1
TPM1-215ENST00000558868 PSTKQ8IV42 348 aaKnown RBP14.4□□□□□ -0.1
TPM1-215ENST00000558868 ZDHHC14Q8IZN3 488 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 CLEC4CQ8WTT0 213 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 C1orf54Q8WWF1 131 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 HSPH1Q92598 858 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 SLC2A13Q96QE2 648 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 C11orf84Q9BUA3 381 aaPredicted RBP14.4□□□□□ -0.1
TPM1-215ENST00000558868 FUT8Q9BYC5 575 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 ULBP1Q9BZM6 244 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 VIPAS39Q9H9C1 493 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 KLHL11Q9NVR0 708 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 COLQQ9Y215 455 aaPredicted RBP14.4□□□□□ -0.1
TPM1-215ENST00000558868 HTTP42858 3142 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 C3orf70A6NLC5 250 aaPredicted RBP14.39□□□□□ -0.11
TPM1-215ENST00000558868 HHLA1C9JL84 531 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 CAPN9O14815 690 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 KIAA0355O15063 1070 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 GALTP07902 379 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 FGFR3P22607 806 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 CARSP49589 748 aaKnown RBP14.39□□□□□ -0.11
TPM1-215ENST00000558868 SULT1E1P49888 294 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 GATMP50440 423 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 CDH6P55285 790 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 MRPL58Q14197 206 aaKnown RBP14.39□□□□□ -0.11
TPM1-215ENST00000558868 PPP1R7Q15435 360 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 LRRC26Q2I0M4 334 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 SMTNL2Q2TAL5 461 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 CTXN3Q4LDR2 81 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 KCNT1Q5JUK3 1230 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 VARS2Q5ST30 1063 aaKnown RBP14.39□□□□□ -0.11
TPM1-215ENST00000558868 ERMARDQ5T6L9 678 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 TTC27Q6P3X3 843 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 FUT10Q6P4F1 479 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 VSTM1Q6UX27 236 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 BBS12Q6ZW61 710 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 BEND5Q7L4P6 421 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 LRRTM3Q86VH5 581 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 DEFB106AQ8N104 65 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 ZMIZ2Q8NF64 920 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 PRDM16Q9HAZ2 1276 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.39□□□□□ -0.11
TPM1-215ENST00000558868 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
TPM1-215ENST00000558868 PCDHB5Q9Y5E4 795 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 SCN5AQ14524 2016 aa14.39□□□□□ -0.11
TPM1-215ENST00000558868 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 F8W810 466 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 MAP2K7O14733 419 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 NDC80O14777 642 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 TRIM66O15016 1216 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 ENDOD1O94919 500 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 LTFP02788 710 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 KRT10P13645 584 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 RAG1P15918 1043 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 MAGEA11P43364 429 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
TPM1-215ENST00000558868 HDAC4P56524 1084 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 BCAR1P56945 870 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 SNX1Q13596 522 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 CASP8Q14790 479 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 LLGL1Q15334 1064 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 SH3PXD2AQ5TCZ1 1133 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 ANKS3Q6ZW76 656 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 SND1Q7KZF4 910 aaKnown RBP eCLIP14.38□□□□□ -0.11
TPM1-215ENST00000558868 RFX6Q8HWS3 928 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 NT5C3BQ969T7 300 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 CCDC114Q96M63 670 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 PEBP4Q96S96 227 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 NPY6RQ99463 290 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 HERPUD2Q9BSE4 406 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 CALN1Q9BXU9 219 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 TMLHEQ9NVH6 421 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 MARCH5Q9NX47 278 aa14.38□□□□□ -0.11
TPM1-215ENST00000558868 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 ZSCAN5CA6NGD5 496 aaPredicted RBP14.37□□□□□ -0.11
TPM1-215ENST00000558868 DAPK3O43293 454 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 LIASO43766 372 aa14.37□□□□□ -0.11
TPM1-215ENST00000558868 CST8O60676 142 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms