RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ZNF606Q8WXB4 792 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 UBXN6Q9BZV1 441 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 GANQ9H2C0 597 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 TBC1D17Q9HA65 648 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 NMUR1Q9HB89 426 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 NLRC4Q9NPP4 1024 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 USP3Q9Y6I4 520 aa16.68■□□□□ 0.26
RABGGTA-206ENST00000558649 GOLGA6L19H0YKK7 550 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 LEFTY2O00292 366 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 MDM4O15151 490 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 EPHB6O15197 1021 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 OLFM2O95897 454 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 TBX18O95935 607 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 ZBED1O96006 694 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 SERPINC1P01008 464 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 RARGP13631 454 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 PFKLP17858 780 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 CD72P21854 359 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 CLCN1P35523 988 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 TUBP50607 506 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 KPNA1P52294 538 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 SLC7A9P82251 487 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 ZXDBP98169 803 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 C10orf120Q5SQS8 335 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 SNX30Q5VWJ9 437 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 PMF1Q6P1K2 205 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 FBXL6Q8N531 539 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 SLC35F5Q8WV83 523 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 NAA15Q9BXJ9 866 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 GKN1Q9NS71 199 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 GTSE1Q9NYZ3 720 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 CFAP97Q9P2B7 532 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 WNT6Q9Y6F9 365 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 KMT2EQ8IZD2 1858 aa16.67■□□□□ 0.26
RABGGTA-206ENST00000558649 FAM170AA1A519 330 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 F8VZ95 297 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 TEX33O43247 280 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 TRIOO75962 3097 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 SOX9P48436 509 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 YWHAGP61981 247 aaKnown RBP eCLIP16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 SCD5Q86SK9 330 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 FAM71AQ8IYT1 594 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 KCTD13Q8WZ19 329 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 SHDQ96IW2 340 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 FOXQ1Q9C009 403 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 MIS12Q9H081 205 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 EBF3Q9H4W6 596 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 DUS2Q9NX74 493 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 PIAS3Q9Y6X2 628 aa16.66■□□□□ 0.26
RABGGTA-206ENST00000558649 ARNTLO00327 626 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 GFPT2O94808 682 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 RALAP11233 206 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 ARSAP15289 507 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 KRT9P35527 623 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 GPD2P43304 727 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 IFNAR2P48551 515 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 PSEN1P49768 467 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 TAF3Q5VWG9 929 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 CWF19L1Q69YN2 538 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 RSRC2Q7L4I2 434 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 BMP8AQ7Z5Y6 402 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 ARHGAP18Q8N392 663 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 CLEC4CQ8WTT0 213 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 ERGIC2Q96RQ1 377 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 TSPY26PQ9H489 355 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 RASAL2Q9UJF2 1139 aa16.65■□□□□ 0.26
RABGGTA-206ENST00000558649 GABBR2O75899 941 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 CAVIN2O95810 425 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 BPIFB4P59827 614 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 PRKCQQ04759 706 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 EFEMP1Q12805 493 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 BTBD8Q5XKL5 378 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 ASTLQ6HA08 431 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 DDX42Q86XP3 938 aaKnown RBP eCLIP16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 MIB1Q86YT6 1006 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 OSCP1Q8WVF1 389 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 EDEM1Q92611 657 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 ZFRQ96KR1 1074 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 NAP1L5Q96NT1 182 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 HPS4Q9NQG7 708 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 CNGB3Q9NQW8 809 aa16.64■□□□□ 0.25
RABGGTA-206ENST00000558649 CYTH4Q9UIA0 394 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms