RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SPAARA0A1B0GVQ0 90 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 BCLAF3A2AJT9 711 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 FAM187AA6NFU0 413 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CDX4O14627 284 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 GABRDO14764 452 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CLSTN1O94985 981 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 IL18RAPO95256 599 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 APBB3O95704 486 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 FGF19O95750 216 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 TBX18O95935 607 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 USP17L7P0C7H9 530 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 TMEM191BP0C7N4 346 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 SDHBP21912 280 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CNR2P34972 360 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 STAT6P42226 847 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MLLT6P55198 1093 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MYL6P60660 151 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 RPL10AP62906 217 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 RBP5P82980 135 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MYL7Q01449 175 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 FAM160A1Q05DH4 1040 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 TAF10Q12962 218 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 KCNB1Q14721 858 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 PDGFRLQ15198 375 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 KYAT1Q16773 422 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 FAM171BQ6P995 826 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MARCH9Q86YJ5 346 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CPA6Q8N4T0 437 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 HMGB4Q8WW32 186 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 DHX58Q96C10 678 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 PCED1BQ96HM7 432 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF560Q96MR9 790 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 FNBP1Q96RU3 617 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 ACOX2Q99424 681 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 ACBD6Q9BR61 282 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 IER2Q9BTL4 223 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 LSM14BQ9BX40 385 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 OXCT2Q9BYC2 517 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CCSER1Q9C0I3 900 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 GZF1Q9H116 711 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 SDCBP2Q9H190 292 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 SMYD3Q9H7B4 428 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CCSER2Q9H7U1 834 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 INTS13Q9NVM9 706 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 NXF1Q9UBU9 619 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 NUDT5Q9UKK9 219 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 HCN2Q9UL51 889 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 CPQQ9Y646 472 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 ADAMTS9Q9P2N4 1935 aa7.3□□□□□ -1.24
PRPF40B-214ENST00000551320 MYO18AQ92614 2054 aaKnown RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 FASNP49327 2511 aaKnown RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF840PA6NDX5 716 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 MDM4O15151 490 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 HYAL3O43820 417 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 LRP3O75074 770 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ADAM23O75077 832 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 BEST1O76090 585 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 MBL2P11226 248 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 SYT1P21579 422 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 DRD1P21728 446 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ITPKAP23677 461 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 HOXA6P31267 233 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ELOAQ14241 798 aaKnown RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 DHCR24Q15392 516 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 LY6G5CQ5SRR4 150 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 RHBDF2Q6PJF5 856 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 SYT13Q7L8C5 426 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 TRAPPC11Q7Z392 1133 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 CYP2U1Q7Z449 544 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ANKMY2Q8IV38 441 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ADGRG2Q8IZP9 1017 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 SYNPOQ8N3V7 929 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 IL17RCQ8NAC3 791 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 OR6B3Q8NGW1 331 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ATP2A3Q93084 1043 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 MSANTD3Q96H12 275 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ZC3H10Q96K80 434 aaKnown RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 MYRFLQ96LU7 910 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 CAMK1GQ96NX5 476 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 ST6GALNAC4Q9H4F1 302 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 VPS45Q9NRW7 570 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 HSFX1Q9UBD0 423 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 HMGXB4Q9UGU5 601 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 KCNG1Q9UIX4 513 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 KIF3AQ9Y496 699 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 SRPRBQ9Y5M8 271 aaKnown RBP7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 RAD54BQ9Y620 910 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 FAM208BQ5VWN6 2430 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 KIAA1549LQ6ZVL6 1849 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 LOC400499M0QZD8 3231 aa7.29□□□□□ -1.24
PRPF40B-214ENST00000551320 NUP205Q92621 2012 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 WASH3PC4AMC7 463 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms