RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 CRTC2Q53ET0 693 aaPredicted RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TDRD12Q587J7 1177 aaKnown RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 RARS2Q5T160 578 aaKnown RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TAF3Q5VWG9 929 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 BEND5Q7L4P6 421 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TMC8Q8IU68 726 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TMTC1Q8IUR5 882 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 CCDC170Q8IYT3 715 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 C12orf76Q8N812 135 aaPredicted RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 C1orf131Q8NDD1 294 aaKnown RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 PPP1R13BQ96KQ4 1090 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 PCDHB18PQ96TA0 734 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TRIM62Q9BVG3 475 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 IL21Q9HBE4 155 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TMEM51Q9NW97 253 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 ARHGAP20Q9P2F6 1191 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 WDR35Q9P2L0 1181 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 FAM50BQ9Y247 325 aa12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 ZFP37Q9Y6Q3 630 aaPredicted RBP12.44□□□□□ -0.42
CYB561A3-214ENST00000540139 TULP2O00295 520 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 DDX3XO00571 662 aaKnown RBP eCLIP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 GABBR2O75899 941 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ZBED1O96006 694 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 F11P03951 625 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 SKILP12757 684 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 COL9A1P20849 921 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 KCNA5P22460 613 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 WEE1P30291 646 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 TUBP50607 506 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 TKTL1P51854 596 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ZNF268Q14587 947 aaPredicted RBP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 PRSS36Q5K4E3 855 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ACAD10Q6JQN1 1059 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ARCQ7LC44 396 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ERICH1Q86X53 443 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 SIX6OS1Q8N1H7 587 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 SCAMP5Q8TAC9 235 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 CORO1BQ9BR76 489 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ASNSD1Q9NWL6 643 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 CLIC5Q9NZA1 410 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 CYTH4Q9UIA0 394 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 STRIP2Q9ULQ0 834 aa12.43□□□□□ -0.42
CYB561A3-214ENST00000540139 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 ZNF840PA6NDX5 716 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 RTN2O75298 545 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 CALB1P05937 261 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 CDR1P51861 262 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TAF10Q12962 218 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 NAA35Q5VZE5 725 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 KLHDC10Q6PID8 442 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GAREM2Q75VX8 874 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GPRIN1Q7Z2K8 1008 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TADA2BQ86TJ2 420 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 SPC24Q8NBT2 197 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 UBXN4Q92575 508 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 FBXO32Q969P5 355 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 NHEJ1Q9H9Q4 299 aaPredicted RBP12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TLR8Q9NR97 1041 aaKnown RBP12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 GDE1Q9NZC3 331 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 TRPM5Q9NZQ8 1165 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
CYB561A3-214ENST00000540139 NCOR1O75376 2440 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 E5RJQ4 531 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 PAPSS1O43252 624 aaPredicted RBP12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 MBTPS2O43462 519 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 LCA5LO95447 670 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 PLEKP08567 350 aaPredicted RBP12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 MYBL1P10243 752 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 FSHRP23945 695 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 GABRR2P28476 465 aa12.41□□□□□ -0.42
CYB561A3-214ENST00000540139 RGS7P49802 495 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms