RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 WDR87Q6ZQQ6 2873 aa10.74□□□□□ -0.69
SF3A3-204ENST00000462258 EP300Q09472 2414 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-204ENST00000462258 E2F8A0AVK6 867 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 K7ESF4 209 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 IRF1P10914 325 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 TBXAS1P24557 533 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-204ENST00000462258 PGFP49763 221 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 GALK1P51570 392 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 STX17P56962 302 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 DMWDQ09019 674 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 LRMPQ12912 555 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 FBXO43Q4G163 708 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 TRIML1Q8N9V2 468 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 SUMF1Q8NBK3 374 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 HEXIM2Q96MH2 286 aaKnown RBP10.73□□□□□ -0.69
SF3A3-204ENST00000462258 DUSP16Q9BY84 665 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 FBRSL1Q9HCM7 1045 aaKnown RBP10.73□□□□□ -0.69
SF3A3-204ENST00000462258 CYLDQ9NQC7 956 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 GPR179Q6PRD1 2367 aa10.73□□□□□ -0.69
SF3A3-204ENST00000462258 A0A1W2PQH9 124 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 CHURC1-FNTBB4DL54 471 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 ATG13O75143 517 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 ADH1CP00326 375 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 ADH5P11766 374 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 OPRD1P41143 372 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 FNTBP49356 437 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 KIF11P52732 1056 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 GOLGA8FQ08AF8 430 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 GOLGA8DPQ0D2H9 430 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 CETN1Q12798 172 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 DHCR24Q15392 516 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 CAMK4Q16566 473 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 GAB4Q2WGN9 574 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 HEATR6Q6AI08 1181 aaKnown RBP10.72□□□□□ -0.69
SF3A3-204ENST00000462258 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 LONP2Q86WA8 852 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 UBR7Q8N806 425 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 RPLP0P6Q8NHW5 317 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 RUBCNQ92622 972 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
SF3A3-204ENST00000462258 ACDQ96AP0 544 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 OTUB2Q96DC9 234 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 NT5C1BQ96P26 610 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 OSER1Q9NX31 292 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 TBC1D14Q9P2M4 693 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 NCDNQ9UBB6 729 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 NAGPAQ9UK23 515 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 TSPAN16Q9UKR8 245 aa10.72□□□□□ -0.69
SF3A3-204ENST00000462258 PTPRZ1P23471 2315 aaPredicted RBP10.72□□□□□ -0.69
SF3A3-204ENST00000462258 MDM4O15151 490 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PMM2O15305 246 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 P4HA2O15460 535 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 GNA14O95837 355 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 TBX18O95935 607 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 RARGP13631 454 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 CD19P15391 556 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 ATP5C1P36542 298 aaKnown RBP10.71□□□□□ -0.69
SF3A3-204ENST00000462258 EIF2DP41214 584 aaKnown RBP10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PSEN1P49768 467 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 BCAT1P54687 386 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 MARSP56192 900 aaKnown RBP10.71□□□□□ -0.69
SF3A3-204ENST00000462258 SLC8A3P57103 927 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 KDSRQ06136 332 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 SPAG17Q6Q759 2223 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PRR23BQ6ZRT6 265 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 TADA2BQ86TJ2 420 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PIGZQ86VD9 579 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 C12orf40Q86WS4 652 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 TTC30AQ86WT1 665 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 TRIM59Q8IWR1 403 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 BBS7Q8IWZ6 715 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PPM1KQ8N3J5 372 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 ANKRD52Q8NB46 1076 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 WBP2Q969T9 261 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 SPTBN4Q9H254 2564 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
SF3A3-204ENST00000462258 KIAA1468Q9P260 1216 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 HESX1Q9UBX0 185 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 LSM7Q9UK45 103 aaKnown RBP10.71□□□□□ -0.69
SF3A3-204ENST00000462258 RAB23Q9ULC3 237 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 SLC8A2Q9UPR5 921 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 DMXL1Q9Y485 3027 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
SF3A3-204ENST00000462258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 O00370 1275 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 XPO1O14980 1071 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 FGFR1OPO95684 399 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 AFPP02771 609 aaKnown RBP10.7□□□□□ -0.7
SF3A3-204ENST00000462258 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 HOXA6P31267 233 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 HOXC13P31276 330 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 SEC13P55735 322 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 GAD2Q05329 585 aa10.7□□□□□ -0.7
SF3A3-204ENST00000462258 BST2Q10589 180 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms