RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	MARS	P56192	900 aa	Known RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	MAP3K7CL	P57077	242 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	SLC7A9	P82251	487 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	LMNB2	Q03252	620 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	INCA1	Q0VD86	236 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	MAN2A1	Q16706	1144 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	PKN3	Q6P5Z2	889 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	GBP6	Q6ZN66	633 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	RBM43	Q6ZSC3	357 aa	Known RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	WDR5B	Q86VZ2	330 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	TTC39C	Q8N584	583 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	ANKRD20A12P	Q8NF67	263 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	SH3RF2	Q8TEC5	729 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	ATP2A3	Q93084	1043 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	CYP2S1	Q96SQ9	504 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	ECT2	Q9H8V3	914 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	PARD6A	Q9NPB6	346 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	SAMSN1	Q9NSI8	373 aa	Known RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	DUS2	Q9NX74	493 aa	Known RBP	13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	TAB2	Q9NYJ8	693 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	COQ4	Q9Y3A0	265 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	ATG2B	Q96BY7	2078 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	RALGAPA1	Q6GYQ0	2036 aa		13.44	□□□□□ -0.26
FDPS-204	ENST00000461507	PRR5-ARHGAP8	B1AHC4	643 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	HR	O43593	1189 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	OAS1	P00973	400 aa	Known RBP	13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	RET	P07949	1114 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	KRT5	P13647	590 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	HDC	P19113	662 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	CDK11B	P21127	795 aa	Known RBP	13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	USP8	P40818	1118 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	IFNAR2	P48551	515 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	ARHGAP8	P85298	464 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	ZXDB	P98169	803 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	FBXO43	Q4G163	708 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	ANO6	Q4KMQ2	910 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	TMEM270	Q6UE05	265 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	ARHGEF19	Q8IW93	802 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	AOPEP	Q8N6M6	819 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	EHBP1	Q8NDI1	1231 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	EZH1	Q92800	747 aa	Predicted RBP	13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	EXOC4	Q96A65	974 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	CYFIP2	Q96F07	1278 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	TMEM176A	Q96HP8	235 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	P2RY13	Q9BPV8	354 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	TUBGCP2	Q9BSJ2	902 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	NAT10	Q9H0A0	1025 aa	Known RBP	13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	TRPM5	Q9NZQ8	1165 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	RAB23	Q9ULC3	237 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	WNT6	Q9Y6F9	365 aa		13.43	□□□□□ -0.26
FDPS-204	ENST00000461507	SYCE3	A1L190	88 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	ATG13	O75143	517 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	RNF40	O75150	1001 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	EGF	P01133	1207 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	SDHB	P21912	280 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	MCCD1	P59942	119 aa	Predicted RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	MYL5	Q02045	173 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	SIM2	Q14190	667 aa	Predicted RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	ARHGAP44	Q17R89	818 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	EXOC3L4	Q17RC7	722 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	KLHL40	Q2TBA0	621 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	NAIF1	Q69YI7	327 aa	Predicted RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	FUK	Q8N0W3	1084 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	ENOX1	Q8TC92	643 aa	Known RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	OVCA2	Q8WZ82	227 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	KAT5	Q92993	513 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	FBXO32	Q969P5	355 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	KCNK16	Q96T55	309 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	IL37	Q9NZH6	218 aa		13.42	□□□□□ -0.26
FDPS-204	ENST00000461507	SPTBN2	O15020	2390 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	FAM92A	A1XBS5	289 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	LEFTY2	O00292	366 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	RTN3	O95197	1032 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	LETM1	O95202	739 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	NFATC1	O95644	943 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	HOXC13	P31276	330 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	GALK1	P51570	392 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SLC5A3	P53794	718 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	RAD23B	P54727	409 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SLC8A3	P57103	927 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	TAF10	Q12962	218 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	GOLGA7B	Q2TAP0	167 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	GAB4	Q2WGN9	574 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	VWA3B	Q502W6	1294 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SGO2	Q562F6	1265 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	TCP11X2	Q5H9J9	407 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	SNX30	Q5VWJ9	437 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	PAQR9	Q6ZVX9	377 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	DGLUCY	Q7Z3D6	616 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	IRF2BP1	Q8IU81	584 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	NUP93	Q8N1F7	819 aa		13.41	□□□□□ -0.26
FDPS-204	ENST00000461507	CRYBG2	Q8N1P7	616 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms