RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 NUDT18Q6ZVK8 323 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 WDR5BQ86VZ2 330 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 ZMIZ2Q8NF64 920 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 RIN3Q8TB24 985 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 ACDQ96AP0 544 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 TMEM176AQ96HP8 235 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 HEXIM2Q96MH2 286 aaKnown RBP15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 DUSP16Q9BY84 665 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 NACA2Q9H009 215 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 NCDNQ9UBB6 729 aa15.36■□□□□ 0.05
NIF3L1-205ENST00000409588 ANAPC1Q9H1A4 1944 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 COCHO43405 550 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 GNA14O95837 355 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CCDC130P13994 396 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 ATP5C1P36542 298 aaKnown RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 HSF5Q4G112 596 aaPredicted RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 TCERG1LQ5VWI1 586 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 Q6ZS52 159 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CLEC20AQ6ZU45 233 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 SYT13Q7L8C5 426 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 TTC16Q8NEE8 873 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CHFRQ96EP1 664 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CYLDQ9NQC7 956 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CISHQ9NSE2 258 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 CFAP97Q9P2B7 532 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 GMEB2Q9UKD1 530 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 SMG5Q9UPR3 1016 aaKnown RBP15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 SH3BP1Q9Y3L3 701 aa15.35■□□□□ 0.05
NIF3L1-205ENST00000409588 FRYLO94915 3013 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 P4HA2O15460 535 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 BEST1O76090 585 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 EGFP01133 1207 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 RETP07949 1114 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 CD58P19256 250 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 KIF11P52732 1056 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 MRPS21P82921 87 aaKnown RBP15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 GAD2Q05329 585 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 SIM2Q14190 667 aaPredicted RBP15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 DHCR24Q15392 516 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 ARHGAP17Q68EM7 881 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 ARHGAP18Q8N392 663 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 SEMA4DQ92854 862 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 FBRSL1Q9HCM7 1045 aaKnown RBP15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 FAM49BQ9NUQ9 324 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 CLIC5Q9NZA1 410 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 HMGXB4Q9UGU5 601 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 EBF1Q9UH73 591 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 USP3Q9Y6I4 520 aa15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 EP300Q09472 2414 aaPredicted RBP15.34■□□□□ 0.05
NIF3L1-205ENST00000409588 PRR5-ARHGAP8B1AHC4 643 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 HHLA1C9JL84 531 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 TLR5O60602 858 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 RNF40O75150 1001 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 RALAP11233 206 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ADORA2BP29275 332 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 TNFRSF4P43489 277 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 PLA2G4AP47712 749 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ID4P47928 161 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ARHGAP8P85298 464 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 DCAF17Q5H9S7 520 aaPredicted RBP15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 BTBD8Q5XKL5 378 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 RHBDF2Q6PJF5 856 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 CCDC186Q7Z3E2 898 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 TRIML1Q8N9V2 468 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ELMO3Q96BJ8 720 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 TWNKQ96RR1 684 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 PNKPQ96T60 521 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 SMPD4Q9NXE4 827 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 GMIPQ9P107 970 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 ZNF510Q9Y2H8 683 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 GVINP1Q7Z2Y8 2422 aa15.33■□□□□ 0.04
NIF3L1-205ENST00000409588 HRO43593 1189 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 GRIA2P42262 883 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 FNTBP49356 437 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 PMS1P54277 932 aaKnown RBP15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 RAD23BP54727 409 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 ORC1Q13415 861 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 MORC3Q14149 939 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 PPP1R26Q5T8A7 1209 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 SMYD5Q6GMV2 418 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 KIAA2013Q8IYS2 634 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 SLC4A11Q8NBS3 891 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 ZFRQ96KR1 1074 aaKnown RBP15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 CCSER2Q9H7U1 834 aa15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.32■□□□□ 0.04
NIF3L1-205ENST00000409588 WDR35Q9P2L0 1181 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms